Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SKP145-201ENST00000363291 303 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RNU4-40P-201ENST00000364351 143 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 DUTP5-201ENST00000406790 469 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RNU2-22P-201ENST00000411266 212 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 SETP15-201ENST00000412724 337 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 OR6C64P-201ENST00000419708 825 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 USP9YP24-201ENST00000434374 697 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 USP9YP17-201ENST00000444617 696 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 SNORD125-201ENST00000459538 96 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC133963.2-201ENST00000513686 578 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-941P-201ENST00000516346 108 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 CDH12P4-201ENST00000517835 295 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 CDH12P3-201ENST00000517935 295 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 CDH12P1-201ENST00000518435 295 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 MRPS36P5-201ENST00000551909 298 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC106734.1-201ENST00000568646 663 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 RBM22P1-201ENST00000578589 1214 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC106052.1-201ENST00000608029 497 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC079395.3-201ENST00000615161 484 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AL355493.4-201ENST00000618530 292 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 AC011933.2-201ENST00000578539 2790 ntBASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX2IPQ9Y2D8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 HSPD1P11-201ENST00000508643 1702 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 U3.2-201ENST00000362981 210 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC096921.1-201ENST00000411661 375 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AL139128.1-201ENST00000413921 941 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC093162.1-201ENST00000419682 124 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC005005.2-201ENST00000420779 380 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 OR10T1P-201ENST00000424327 947 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AL138787.1-202ENST00000437804 898 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AL035090.1-201ENST00000454835 332 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 PSAT1P4-201ENST00000466500 526 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 RPS4XP20-201ENST00000505751 772 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC021106.1-201ENST00000509020 1058 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 UBTFL10-201ENST00000528532 562 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 OR5AM1P-201ENST00000532136 1032 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC068993.1-201ENST00000546724 589 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 CYB5AP5-201ENST00000549779 389 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 RPL10P14-201ENST00000565265 298 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC027455.1-201ENST00000574104 594 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC011447.4-201ENST00000587562 111 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 VN1R87P-201ENST00000596706 487 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 DUXAP3-201ENST00000603616 594 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms