Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 RN7SKP34-201ENST00000516142 244 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 DUX4L52-201ENST00000549363 777 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC105129.1-201ENST00000560250 297 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL390726.5-202ENST00000564800 256 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC012414.7-202ENST00000622705 1090 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC010435.1-201ENST00000623353 1177 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC011755.1-201ENST00000623763 2049 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC006453.5-201ENST00000636451 619 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC025574.1-201ENST00000554784 1653 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 RNU6-386P-201ENST00000362650 107 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 SNORA70F-201ENST00000384142 135 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 RNU1-82P-201ENST00000390851 165 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 RPS3AP23-201ENST00000401762 784 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AL049697.2-201ENST00000403708 294 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 RN7SKP106-201ENST00000410832 272 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 ATG4AP1-201ENST00000416893 538 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 VN1R37P-201ENST00000419096 748 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC069213.2-201ENST00000420238 366 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 ARAFP1-201ENST00000422172 605 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC012512.1-201ENST00000446594 718 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 TPT1P13-201ENST00000449760 499 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 C1DP3-201ENST00000455013 423 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 MTND6P32-201ENST00000457611 483 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 OR52A4P-203ENST00000498233 1014 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC073358.1-201ENST00000505671 684 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 HIGD1AP5-201ENST00000529959 259 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC005868.1-201ENST00000536421 331 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC093249.4-201ENST00000564755 259 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 FAM60CP-201ENST00000591086 664 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC008745.1-201ENST00000604064 271 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AL391597.1-201ENST00000618707 694 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AL158062.1-201ENST00000619632 745 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 AC021106.3-201ENST00000623925 531 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 MTCO1P8-201ENST00000416914 1523 ntBASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCF1Q9UBD9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 OR4K15-201ENST00000305051 1216 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 MIR365B-201ENST00000362317 111 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 RNA5SP332-201ENST00000391063 115 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC104333.2-201ENST00000422630 192 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC097523.2-201ENST00000435551 652 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 ARAFP2-201ENST00000440565 559 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 CEACAMP6-201ENST00000452007 574 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 RN7SL459P-201ENST00000481078 302 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 RNU6-551P-201ENST00000516661 103 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms