Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RANP1-206ENST00000455094 651 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC010469.1-201ENST00000463864 576 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC113430.1-201ENST00000506872 718 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC025768.1-201ENST00000510057 267 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 SNORA26.10-201ENST00000516427 141 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 RN7SKP260-201ENST00000516907 149 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AF186190.1-201ENST00000517470 480 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 NMNAT1P1-201ENST00000554095 876 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC015982.1-201ENST00000608113 465 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC016542.1-201ENST00000608259 493 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC135803.1-201ENST00000608748 565 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC084036.1-201ENST00000609190 508 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC015813.4-201ENST00000610469 179 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC090527.3-201ENST00000619041 548 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 MIR7154-201ENST00000620673 73 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC025262.3-201ENST00000623666 360 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 AC011815.3-201ENST00000624194 473 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 TLK1P1-201ENST00000456760 2440 ntBASIC4.65□□□□□ -1.67
NDE1Q9NXR1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NDE1Q9NXR1 HSPD1P14-201ENST00000432666 1618 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 OR52B1P-201ENST00000316506 909 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AMZ2P2-201ENST00000406819 1057 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL390774.1-201ENST00000411924 246 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 MTND5P8-201ENST00000449817 1083 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL353718.1-201ENST00000451028 517 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 ATP5G1P3-201ENST00000463301 410 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 MTND3P24-201ENST00000506306 329 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC008628.1-201ENST00000508663 265 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC090568.1-201ENST00000509499 856 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC019227.1-201ENST00000526902 510 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC074029.2-201ENST00000551045 634 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AL121834.1-201ENST00000572284 509 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 RN7SL753P-201ENST00000581238 290 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC023509.5-201ENST00000617434 807 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 MIR1910-201ENST00000636955 80 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 CASC19-281ENST00000642118 1554 ntBASIC4.64□□□□□ -1.67
NDE1Q9NXR1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.64□□□□□ -1.67
NDE1Q9NXR1 DDX6P1-205ENST00000441966 1436 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 DDX18P3-201ENST00000404856 2007 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 RN7SKP15-201ENST00000364742 309 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AL512430.2-201ENST00000406786 339 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC073136.2-201ENST00000417282 849 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 Z74021.1-201ENST00000423610 407 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms