Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 MIR4505-201ENST00000582238 73 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 HIRAP1-201ENST00000605318 787 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC009237.15-201ENST00000610252 501 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC090897.3-201ENST00000636973 1157 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 YES1P1-201ENST00000418510 1628 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC009313.2-201ENST00000417893 1941 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 CR788268.1-201ENST00000603931 1809 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC006042.3-201ENST00000454684 1469 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RNA5SP435-201ENST00000364044 108 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RNA5SP242-201ENST00000364171 118 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RN7SKP269-201ENST00000365545 319 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RNU1-136P-201ENST00000384181 164 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RNU6-636P-201ENST00000384598 107 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 TAS2R15P-201ENST00000390674 928 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AF228730.1-201ENST00000397972 663 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RNA5SP178-201ENST00000410380 128 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 OR6E1P-201ENST00000414424 923 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AL133482.1-201ENST00000415988 498 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC113412.1-201ENST00000425840 504 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 FMO7P-201ENST00000436045 768 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AL359265.1-201ENST00000440296 795 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RPS6P2-201ENST00000454208 705 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC005410.1-202ENST00000460347 485 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 RN7SL717P-201ENST00000478343 297 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC068587.2-201ENST00000478386 781 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 COX6B1P2-201ENST00000489624 230 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC069304.1-201ENST00000491593 704 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC105233.1-201ENST00000498840 781 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ENPP7P11-201ENST00000505915 627 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC098799.3-201ENST00000506095 438 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 DUTP7-201ENST00000507982 486 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 IGLV3-24-201ENST00000517477 197 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 TMEM97P2-201ENST00000517841 403 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 IGJP1-201ENST00000522682 475 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 YWHABP2-201ENST00000540201 713 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 LSM3P2-201ENST00000551246 273 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC012146.2-201ENST00000576545 416 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 VN1R88P-201ENST00000596787 292 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC068313.1-201ENST00000604028 1008 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC002487.1-201ENST00000604565 994 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC008115.3-201ENST00000614874 549 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC009464.1-201ENST00000615731 469 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 VN1R7P-201ENST00000619242 903 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC013470.4-201ENST00000619978 986 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 OR1S1-201ENST00000624470 978 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC016717.3-201ENST00000624730 554 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 AC092608.3-201ENST00000625017 386 ntBASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NECTIN3Q9NQS3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms