Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC034236.3-201ENST00000605999 461 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL023583.1-201ENST00000607518 1143 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC073869.10-201ENST00000642016 354 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 SAMMSON-226ENST00000642089 1582 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL022393.1-201ENST00000625142 1677 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MAPK10-263ENST00000641052 4307 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC099654.2-201ENST00000433031 1980 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 GLUD1P9-201ENST00000420997 1173 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC004074.1-201ENST00000421810 1063 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 EIF2S2P3-201ENST00000428356 999 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AL357520.1-201ENST00000441557 453 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC006967.1-201ENST00000467608 589 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 RN7SL354P-201ENST00000469282 294 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC093267.1-201ENST00000489176 961 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AK4P6-201ENST00000505168 528 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 IGKV1-32-201ENST00000519290 311 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MORF4L1P3-201ENST00000525966 950 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 PDCD5P1-201ENST00000543528 309 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AL512782.1-201ENST00000603093 364 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC084373.1-201ENST00000603311 235 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC123786.2-201ENST00000603459 275 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC012557.1-201ENST00000607115 611 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC009704.2-201ENST00000618739 483 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC022106.2-201ENST00000620114 757 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AP000648.2-201ENST00000624182 404 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 AC009229.4-201ENST00000623854 1947 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
TM9SF3Q9HD45 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 PHKBP1-201ENST00000450951 1951 ntBASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TM9SF3Q9HD45 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 SNORA2.3-201ENST00000383920 135 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 RNU6-225P-201ENST00000384613 103 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AL034374.1-201ENST00000406329 351 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 SNORA77-201ENST00000408716 125 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 DNAJC19P7-201ENST00000428811 344 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC093414.1-201ENST00000434712 514 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 OR1H1P-201ENST00000448731 937 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 NDUFA5P9-201ENST00000472609 340 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 RPL21P6-201ENST00000479171 504 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 LARP7P4-201ENST00000481075 878 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 NPM1P6-201ENST00000521088 871 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC025857.1-201ENST00000525252 377 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC005377.1-201ENST00000605126 456 ntBASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC116447.1-201ENST00000613153 453 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms