Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CASC19-206ENST00000641028 1430 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 SNORA62-201ENST00000365493 153 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 OR1F12-201ENST00000402365 945 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5□□□□□ -1.61
NXF3Q9H4D5 SETP10-201ENST00000424368 814 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5□□□□□ -1.61
NXF3Q9H4D5 MTND6P5-201ENST00000448266 512 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5□□□□□ -1.61
NXF3Q9H4D5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5□□□□□ -1.61
NXF3Q9H4D5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5□□□□□ -1.61
NXF3Q9H4D5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5□□□□□ -1.61
NXF3Q9H4D5 MIR4697-201ENST00000582977 78 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AL356218.2-201ENST00000605264 187 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AL445423.1-201ENST00000609941 536 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AC015914.2-201ENST00000618167 288 ntBASIC5□□□□□ -1.61
NXF3Q9H4D5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5□□□□□ -1.61
NXF3Q9H4D5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5□□□□□ -1.61
NXF3Q9H4D5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5□□□□□ -1.61
NXF3Q9H4D5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NXF3Q9H4D5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5□□□□□ -1.61
NXF3Q9H4D5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NXF3Q9H4D5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC125257.1-201ENST00000560400 2930 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AL391684.1-202ENST00000641293 1636 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 SNORA79B-201ENST00000410557 148 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC004690.1-201ENST00000418216 328 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 CHIAP3-201ENST00000423668 1133 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 RPL12P34-201ENST00000424532 479 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC091390.1-201ENST00000433904 331 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 FTH1P16-201ENST00000435241 552 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC073143.1-201ENST00000436316 395 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 ARAFP2-201ENST00000440565 559 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 RPL23AP93-201ENST00000440847 484 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 EIF2S2P2-201ENST00000447161 982 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 TPT1P12-201ENST00000448968 492 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 RPL21P126-201ENST00000470049 478 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 LSM3P2-201ENST00000551246 273 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC015849.6-201ENST00000605454 474 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 AC012409.3-201ENST00000611343 981 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 SMG1P4-204ENST00000523028 4131 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 A2MP1-204ENST00000566278 4130 ntBASIC4.99□□□□□ -1.61
NXF3Q9H4D5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.99□□□□□ -1.61
NXF3Q9H4D5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AC092111.2-201ENST00000611627 1414 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AC068538.1-201ENST00000376856 336 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 RNU4-25P-201ENST00000410569 230 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 CTSL3P-202ENST00000412179 788 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL592293.2-201ENST00000422292 996 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 Z95152.1-201ENST00000453556 656 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR11I1P-201ENST00000486033 954 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR8G5-201ENST00000524943 1041 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR8A2P-201ENST00000528631 952 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AC068993.1-201ENST00000546724 589 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL358913.1-201ENST00000554342 121 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL161912.3-201ENST00000605404 628 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NXF3Q9H4D5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms