Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 RNU6-452P-201ENST00000384406 107 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 RN7SKP216-201ENST00000411050 312 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 QRSL1P2-201ENST00000418582 964 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC115283.1-201ENST00000427353 400 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 DYNLL1P7-201ENST00000429273 258 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC004938.1-201ENST00000438468 308 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC105402.2-201ENST00000438503 358 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC245517.2-201ENST00000442890 346 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 RN7SL790P-201ENST00000474043 298 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC093270.2-201ENST00000486157 792 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 HMGB1P44-201ENST00000508597 572 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC008676.3-201ENST00000521237 435 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC131935.1-201ENST00000524621 333 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AP004607.2-201ENST00000533949 322 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC087477.6-201ENST00000559595 843 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 RN7SL230P-201ENST00000580835 303 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AC008814.1-201ENST00000603797 406 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 MIR6809-201ENST00000612189 116 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 PANDAR-201ENST00000629595 1506 ntBASIC3.6□□□□□ -1.83
MAP1LC3CQ9BXW4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 Y_RNA.209-201ENST00000364156 111 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 CYP4F29P-201ENST00000420685 446 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AL356806.1-201ENST00000422524 916 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 GSTM5P1-201ENST00000434751 660 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 OR6D1P-201ENST00000436165 939 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 RAD1P2-201ENST00000446414 663 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 PPIAP3-201ENST00000450588 505 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 HMGB1P7-201ENST00000450921 612 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 RPL37P3-201ENST00000456825 293 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 HMGB1P47-201ENST00000511281 589 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 RNA5SP309-201ENST00000516670 106 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 OR10G5P-201ENST00000532733 358 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AL512310.9-201ENST00000553311 948 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 MIR4701-201ENST00000583094 63 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC025946.2-201ENST00000603398 234 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC084036.1-201ENST00000609190 508 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC245389.2-201ENST00000616023 576 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC243756.2-201ENST00000618406 463 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 AC242843.1-201ENST00000618702 573 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 MIR7154-201ENST00000620673 73 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 MTND4P31-201ENST00000425607 1343 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.59□□□□□ -1.83
MAP1LC3CQ9BXW4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MAP1LC3CQ9BXW4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms