Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CDK8P2-201ENST00000415020 547 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL139415.2-201ENST00000431968 163 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC129850.1-201ENST00000436203 508 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 RBMX2P4-201ENST00000441256 376 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 OR2AF1P-201ENST00000454899 889 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 RN7SL72P-201ENST00000460697 269 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 MRE11P1-201ENST00000464884 2127 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC011825.1-201ENST00000484967 388 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC092851.1-201ENST00000535964 478 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 NBEAP1-201ENST00000554452 979 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC027104.1-201ENST00000563702 681 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 ACTR3BP3-201ENST00000565577 979 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 SNORD95-201ENST00000579879 68 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 MIR1273E-201ENST00000581165 102 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC024060.1-201ENST00000607052 494 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 FRG1HP-204ENST00000617940 757 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL590240.3-201ENST00000621416 943 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC079248.2-201ENST00000623779 326 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC016745.2-201ENST00000608834 3443 ntBASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP1Q96SZ6 AC093909.5-201ENST00000621839 1799 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 RNU4-2-201ENST00000365668 141 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 Z68694.1-201ENST00000413929 841 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 OR6E1P-201ENST00000414424 923 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 FMO7P-201ENST00000436045 768 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 KRT8P51-201ENST00000438938 274 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 EEF1A1P39-201ENST00000440791 250 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 UBE2V1P7-201ENST00000446395 340 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 RHEBP2-201ENST00000450289 600 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 BZW1P2-201ENST00000473537 826 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 SYPL1P1-201ENST00000473622 768 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 STRADBP1-201ENST00000478954 1281 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 RPS7P6-201ENST00000485777 579 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC022447.1-201ENST00000515358 464 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC079064.1-201ENST00000528365 362 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 NPM1P42-201ENST00000560329 862 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 AC015720.2-201ENST00000567709 334 ntBASIC5.9□□□□□ -1.46
CDK5RAP1Q96SZ6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms