Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 MIR550A3-201ENST00000390735 95 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AL121578.1-201ENST00000428051 892 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC007559.1-201ENST00000428736 355 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 RPS17P8-201ENST00000434525 335 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 RAB9AP5-201ENST00000437794 597 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 PA2G4P6-201ENST00000438325 1197 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 ARAFP2-201ENST00000440565 559 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 RAB9AP2-201ENST00000443911 597 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC073587.1-201ENST00000447093 876 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 RN7SL860P-201ENST00000473738 223 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 RPL23AP37-201ENST00000479658 549 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 RN7SL817P-201ENST00000480777 288 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC098583.1-201ENST00000480875 255 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 RNA5SP392-201ENST00000516905 112 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 NPM1P52-201ENST00000518264 846 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC134698.5-201ENST00000519444 336 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 MORF4L1P3-201ENST00000525966 950 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC022882.1-201ENST00000532142 501 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC009117.1-201ENST00000563948 554 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 RN7SL176P-201ENST00000580352 264 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AL121932.1-201ENST00000605542 214 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC087385.3-201ENST00000620477 187 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC004232.3-201ENST00000622977 525 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL21A1Q96P44 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
COL21A1Q96P44 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 VDAC2P1-201ENST00000399358 958 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 CYCSP10-201ENST00000417973 294 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 RPS26P13-201ENST00000419030 330 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 VN1R37P-201ENST00000419096 748 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC004448.2-201ENST00000422360 586 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC106901.1-201ENST00000425086 698 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 PPIAP13-201ENST00000434706 478 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC002553.2-201ENST00000453217 340 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AURKAPS2-201ENST00000454983 333 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 RPS3AP41-201ENST00000462701 778 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 NIP7P2-201ENST00000485801 544 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC104971.1-201ENST00000495117 578 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 RPS4XP18-201ENST00000495480 763 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 STMN1P2-201ENST00000508435 439 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AP000859.1-201ENST00000525536 307 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 BRD9P1-201ENST00000529855 560 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC011270.1-201ENST00000558606 583 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC093249.4-201ENST00000564755 259 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 MIR4436B2-201ENST00000581415 91 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 MIR4436B1-201ENST00000583272 91 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC007497.1-201ENST00000610421 561 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AP005212.4-201ENST00000614206 710 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AF117829.2-201ENST00000619538 361 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL158062.1-201ENST00000619632 745 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL21A1Q96P44 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms