Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 MTND2P11-201ENST00000423638 648 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 EIF2S2P3-201ENST00000428356 999 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC012075.1-201ENST00000436549 580 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC079168.1-201ENST00000458741 345 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 RPL7P48-201ENST00000461513 746 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC084754.1-201ENST00000463466 464 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 RN7SKP141-201ENST00000516167 338 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 SNORA26.10-201ENST00000516427 141 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 RPL23AP53-201ENST00000521854 457 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 FO393422.1-201ENST00000603908 708 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC087283.1-201ENST00000604029 1074 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AL162431.4-201ENST00000604674 411 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AL133445.2-201ENST00000611191 527 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 uc_338.9-201ENST00000617424 182 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC097460.3-201ENST00000623099 442 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 AP003497.2-201ENST00000624220 967 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AC090971.4-201ENST00000560291 1800 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 AP001273.1-201ENST00000624493 3152 ntBASIC4.5□□□□□ -1.69
RFT1Q96AA3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFT1Q96AA3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
RFT1Q96AA3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL445437.1-201ENST00000623157 3087 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 TMSB4XP4-201ENST00000323496 618 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 RNU6-609P-201ENST00000365459 107 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC105402.1-201ENST00000413336 545 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 TATDN1P1-201ENST00000414123 891 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL121882.1-201ENST00000422893 417 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 FABP7P2-201ENST00000429946 379 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL035458.1-201ENST00000433096 585 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL353597.2-202ENST00000434901 373 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 HMGN1P36-201ENST00000446623 298 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 CLIC4P1-201ENST00000453177 535 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC005229.2-201ENST00000456995 399 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 APOOP2-201ENST00000461561 539 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 RPL35AP19-201ENST00000469425 329 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC005912.1-201ENST00000495392 255 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 VTA1P2-201ENST00000520205 911 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 HMGB1P40-201ENST00000525121 540 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 NPM1P47-201ENST00000560843 856 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC079148.1-201ENST00000565944 819 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC015720.2-201ENST00000567709 334 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC090312.1-201ENST00000580637 348 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms