Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC021006.3-201ENST00000530771 192 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC145350.1-201ENST00000567426 208 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 SNORD39.2-201ENST00000579995 76 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AL590392.1-201ENST00000604960 446 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC024589.2-201ENST00000605642 1294 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC090897.3-201ENST00000636973 1157 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC139713.2-210ENST00000641741 992 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 AC116158.1-201ENST00000560231 2129 ntBASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.53□□□□□ -1.36
SMC1BQ8NDV3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC012078.1-201ENST00000405035 1646 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 RNU4-40P-201ENST00000364351 143 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 RNU4-31P-201ENST00000384211 141 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 MIR513B-201ENST00000385136 84 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 MTND4P3-201ENST00000417829 541 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC010099.3-201ENST00000423896 409 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 GTF2IP3-201ENST00000433887 494 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 KCTD10P1-201ENST00000434203 625 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 SEPT14P24-201ENST00000447236 180 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 PTGES3P5-201ENST00000455109 434 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC079080.1-201ENST00000479841 822 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC098583.1-201ENST00000480875 255 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC105384.2-201ENST00000508433 640 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC078899.1-201ENST00000521432 1185 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC009097.3-201ENST00000563557 1018 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC022079.1-201ENST00000621546 602 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC099654.6-201ENST00000636487 512 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 SDAD1P1-202ENST00000524156 2051 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 IRF5P1-201ENST00000504852 2164 ntBASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.52□□□□□ -1.37
SMC1BQ8NDV3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 MIR142-201ENST00000384835 87 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AL021331.1-201ENST00000402817 582 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RPS24P7-201ENST00000416921 246 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC023128.2-201ENST00000420880 1223 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 HSFY3P-201ENST00000444242 1191 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 Z83846.1-201ENST00000446798 265 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 Z92846.1-201ENST00000456203 268 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RPL7P32-201ENST00000457119 744 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 snoU13.1-201ENST00000459157 104 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 NAP1L1P3-201ENST00000462291 880 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RPL21P129-201ENST00000491732 478 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 SNORA70.11-201ENST00000515987 138 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 SNORA70.13-201ENST00000516116 138 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms