Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL445183.3-201ENST00000414168 502 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MTCO2P21-201ENST00000419780 677 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 SYT14P1-201ENST00000481459 721 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 RNU6-311P-201ENST00000516224 102 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 UBTFL10-201ENST00000528532 562 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MIR3614-201ENST00000581261 86 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 RN7SL435P-201ENST00000584418 282 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC005252.1-201ENST00000604518 1063 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC104695.2-201ENST00000605056 775 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC006386.1-201ENST00000619436 415 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AC083865.1-201ENST00000636634 831 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 MFSD8-220ENST00000641243 1422 ntBASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLIP4Q8N3C7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC023421.1-201ENST00000590535 1785 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RNU6-252P-201ENST00000363232 107 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 MIR589-201ENST00000385238 99 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL391422.1-201ENST00000402155 436 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 MIR1282-201ENST00000408865 101 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL358176.3-201ENST00000420757 454 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 OR2AH1P-201ENST00000425717 928 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 NAP1L4P2-201ENST00000425958 899 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 DEFB130D-201ENST00000426866 237 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RPS29P14-201ENST00000431518 171 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 ARF4P4-201ENST00000439608 520 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC245047.2-201ENST00000441060 530 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 PCNPP2-201ENST00000441651 455 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RPSAP39-201ENST00000467439 883 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC100832.1-201ENST00000471945 383 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC133963.2-201ENST00000513686 578 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AP000916.1-201ENST00000533869 835 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC022404.1-201ENST00000555320 273 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC022884.2-201ENST00000578535 580 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 FAM106CP-201ENST00000582212 507 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC008751.2-201ENST00000597885 980 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 BMS1P7-201ENST00000602440 1052 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC009597.2-201ENST00000604659 592 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL365400.2-201ENST00000605604 902 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC106052.1-201ENST00000608029 497 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC015982.1-201ENST00000608113 465 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC093673.2-201ENST00000609674 331 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AL691477.1-201ENST00000624398 162 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC017104.5-201ENST00000637647 639 ntBASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLIP4Q8N3C7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms