Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 uc_338.5-201ENST00000611839 155 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC110769.3-201ENST00000624567 1173 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC073488.8-201ENST00000631952 757 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 OR7E11P-202ENST00000642027 1491 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.84□□□□□ -1.32
DEPDC4Q8N2C3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
DEPDC4Q8N2C3 WBP11P1-201ENST00000562560 1931 ntBASIC6.84□□□□□ -1.32
DEPDC4Q8N2C3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
DEPDC4Q8N2C3 AC007406.5-201ENST00000570140 3170 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL357556.1-201ENST00000421884 1388 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC079178.2-201ENST00000439323 1624 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC107081.3-201ENST00000612715 2034 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RN7SKP174-201ENST00000363803 330 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SNORA20.2-201ENST00000383922 131 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SNORA10-201ENST00000384084 133 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MIR649-201ENST00000384843 97 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RNU6-1158P-201ENST00000391167 107 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 BCRP8-201ENST00000412037 255 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MTCO2P12-201ENST00000427426 682 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC099344.1-201ENST00000433548 492 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RPL7P12-201ENST00000446719 750 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RN7SL325P-201ENST00000460434 283 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MTCO2P29-201ENST00000465212 189 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC005912.1-201ENST00000495392 255 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC114300.1-201ENST00000502347 280 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 EIF3KP1-201ENST00000513279 656 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC022861.1-201ENST00000522981 663 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 OR5B19P-201ENST00000531766 928 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CYCSP28-201ENST00000534284 321 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL355076.3-201ENST00000555838 587 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NDUFA3P1-201ENST00000588007 252 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AL451054.1-201ENST00000621770 772 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CR392039.4-201ENST00000624968 501 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 OR5M2P-202ENST00000641241 4242 ntBASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.83□□□□□ -1.32
DEPDC4Q8N2C3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.82□□□□□ -1.32
DEPDC4Q8N2C3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms