Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC092681.1-201ENST00000297369 291 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 OR4K17-201ENST00000315543 1032 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 RNA5SP428-201ENST00000365129 132 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AP002784.2-201ENST00000397300 549 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 BX664727.1-201ENST00000416024 466 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AL354692.1-201ENST00000423044 315 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 PNRC2P1-201ENST00000423940 420 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 RPL23AP72-201ENST00000492447 435 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 OR5H3P-201ENST00000502817 919 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 GLUD1P3-202ENST00000508551 200 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AP003355.1-201ENST00000518956 587 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 NPM1P35-201ENST00000533043 868 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AL109741.3-201ENST00000561748 592 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC245100.7-201ENST00000609678 442 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 AC006840.1-201ENST00000623069 542 ntBASIC5.65□□□□□ -1.5
HERC6Q8IVU3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 AP005432.1-201ENST00000580891 3485 ntBASIC5.65□□□□□ -1.51
HERC6Q8IVU3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HERC6Q8IVU3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RN7SKP185-201ENST00000362813 326 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RNU6-925P-201ENST00000384629 104 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 MIR320B1-201ENST00000390209 79 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RNU6-244P-201ENST00000391028 104 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AP002530.1-201ENST00000405705 684 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC068287.1-201ENST00000430283 295 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RPL34P20-201ENST00000442771 351 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 LINC02210-201ENST00000444561 288 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC023271.1-201ENST00000445936 1090 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RPS20P4-201ENST00000461659 355 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC063943.1-201ENST00000465434 453 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RN7SL197P-201ENST00000466981 299 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC133963.2-201ENST00000513686 578 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC112198.4-201ENST00000515450 351 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 GLRXP2-201ENST00000555594 321 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 MEMO1P5-201ENST00000604810 406 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC021851.1-201ENST00000608537 1082 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 MIR6758-201ENST00000620653 63 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.64□□□□□ -1.51
HERC6Q8IVU3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HERC6Q8IVU3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms