Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL161722.2-201ENST00000434731 981 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 BX842559.2-201ENST00000451418 605 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC090114.3-201ENST00000479267 829 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNU6-513P-201ENST00000516104 104 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNA5SP228-201ENST00000516232 133 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RN7SKP147-201ENST00000517154 244 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 FTH1P11-201ENST00000517577 551 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 OR5D15P-201ENST00000531671 942 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC092474.3-201ENST00000603022 568 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL023583.1-201ENST00000607518 1143 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AL049539.1-201ENST00000611964 459 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 EIF3FP1-201ENST00000613970 806 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 AC108359.1-201ENST00000616451 1211 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 STX3-208ENST00000641815 3236 ntBASIC5.27□□□□□ -1.57
PRPF39Q86UA1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF39Q86UA1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC017079.1-201ENST00000333650 415 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 RN7SKP103-201ENST00000363848 320 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 SNORA62.2-201ENST00000364672 152 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 U3.32-201ENST00000408116 212 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 MIR1182-201ENST00000408363 97 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 USP9YP19-201ENST00000412165 485 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AL121882.1-201ENST00000422893 417 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AL590762.3-201ENST00000436372 640 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 RPS29P10-201ENST00000439197 166 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 YWHAZP2-201ENST00000440317 728 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 CYCSP24-201ENST00000445119 316 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AL591623.2-201ENST00000449978 222 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 RPL23AP12-201ENST00000467573 473 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 BX284632.1-201ENST00000478218 541 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC068993.1-201ENST00000546724 589 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC025918.2-201ENST00000558683 763 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AP005432.2-201ENST00000608162 586 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AL136295.6-201ENST00000610486 658 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 Mico1.1-201ENST00000611698 204 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC010435.1-201ENST00000623353 1177 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC135068.12-201ENST00000637370 931 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF39Q86UA1 AC008079.2-201ENST00000623543 20396 ntBASIC5.26□□□□□ -1.57
PRPF39Q86UA1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 THAP12P4-201ENST00000528321 2266 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF39Q86UA1 AP001002.1-201ENST00000625148 1513 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 RNA5SP223-201ENST00000365174 120 ntBASIC5.25□□□□□ -1.57
PRPF39Q86UA1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms