Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 COX6CP13-201ENST00000428703 226 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 RPS6P15-201ENST00000431996 751 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC112492.1-201ENST00000449607 712 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC069304.1-201ENST00000491593 704 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 OR9N1P-202ENST00000494289 481 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MTND4LP2-201ENST00000502312 285 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC008427.1-201ENST00000503102 655 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MRPS36P3-201ENST00000519284 130 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 HAUS1P3-201ENST00000523909 662 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC007834.2-201ENST00000536310 343 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 OSBPL9P5-201ENST00000542581 171 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 HMGN2P47-201ENST00000559378 272 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 MTND3P13-201ENST00000574391 343 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC005242.1-201ENST00000585658 438 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 ZNF92P3-201ENST00000596594 954 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC015726.1-201ENST00000602353 681 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AL358072.1-201ENST00000604156 575 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 Z94722.1-201ENST00000604328 474 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 HMGB1P51-201ENST00000605166 638 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC021851.1-201ENST00000608537 1082 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC008115.4-201ENST00000619780 775 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AP002505.2-201ENST00000623585 696 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AC100778.3-201ENST00000580060 1750 ntBASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZNF549Q6P9A3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AL355578.1-201ENST00000607405 1328 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 RNU4-28P-201ENST00000364739 141 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ATP5F1P2-201ENST00000398143 760 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 HMGB3P19-201ENST00000403971 560 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 TRIM60P17-201ENST00000415181 719 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 MTND4LP21-201ENST00000415303 295 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC079355.1-201ENST00000421770 223 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ARAFP1-201ENST00000422172 605 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 CDY12P-201ENST00000440679 1015 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 OR10R1P-201ENST00000441524 1141 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 CDY13P-201ENST00000445813 1015 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC092647.2-201ENST00000452998 253 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC008379.1-201ENST00000463655 464 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC116562.1-201ENST00000485355 781 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 OR2A3P-201ENST00000493774 953 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC011411.1-201ENST00000509592 876 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 MTND1P22-201ENST00000510572 951 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC084373.1-201ENST00000603311 235 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AC095055.1-201ENST00000603472 1113 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 BX005214.3-202ENST00000619809 325 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 FRG1DP-201ENST00000635586 771 ntBASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ZNF549Q6P9A3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms