Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 RPL21P91-201ENST00000429231 479 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 RPL10P17-201ENST00000453852 316 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC103987.1-201ENST00000473394 348 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC104763.1-201ENST00000475274 360 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 RPS4XP18-201ENST00000495480 763 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 HMGB2P1-201ENST00000591146 634 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC005520.3-201ENST00000602874 370 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL590392.1-201ENST00000604960 446 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC140113.4-201ENST00000622087 222 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL049536.1-201ENST00000625043 744 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 AL355852.1-201ENST00000454081 1771 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.56□□□□□ -1.52
RFX7Q2KHR2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RFX7Q2KHR2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 IGKV7-3-201ENST00000357453 298 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 VDAC1P9-201ENST00000412766 841 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 RPL12P28-201ENST00000430852 489 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AL161747.1-201ENST00000480068 358 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 RNA5SP446-201ENST00000515955 82 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AL121890.3-201ENST00000618494 516 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 LINC00622-201ENST00000562811 1570 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 RNA5SP509-201ENST00000364577 119 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC073143.1-201ENST00000436316 395 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 PARP1P2-201ENST00000556806 195 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 AC090181.2-201ENST00000602975 672 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.55□□□□□ -1.52
RFX7Q2KHR2 MLECP1-201ENST00000615893 709 ntBASIC5.55□□□□□ -1.52
RFX7Q2KHR2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 CPHL1P-201ENST00000461341 3407 ntBASIC5.54□□□□□ -1.52
RFX7Q2KHR2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AC093849.1-201ENST00000563631 2209 ntBASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AL391684.1-202ENST00000641293 1636 ntBASIC5.54□□□□□ -1.52
RFX7Q2KHR2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AL592182.3-201ENST00000642132 3304 ntBASIC5.54□□□□□ -1.52
RFX7Q2KHR2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.54□□□□□ -1.52
RFX7Q2KHR2 AL162591.2-201ENST00000449634 317 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms