Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 RPS6P2-201ENST00000454208 705 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC090142.1-201ENST00000465776 462 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC083982.1-201ENST00000485679 344 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.2□□□□□ -1.74
H3F3AP84243 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.2□□□□□ -1.74
H3F3AP84243 AC134698.5-201ENST00000519444 336 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 AC011270.1-201ENST00000558606 583 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 RN7SL652P-201ENST00000577769 300 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 MIR4443-201ENST00000585052 53 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 AC098935.2-201ENST00000604222 466 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 QTRT1P1-201ENST00000604344 1078 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 AP001784.1-201ENST00000624107 428 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.2□□□□□ -1.74
H3F3AP84243 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
H3F3AP84243 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
H3F3AP84243 OR51H2P-202ENST00000641424 3046 ntBASIC4.2□□□□□ -1.74
H3F3AP84243 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H3F3AP84243 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H3F3AP84243 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3F3AP84243 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3F3AP84243 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3F3AP84243 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3F3AP84243 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3F3AP84243 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 RNU1-83P-201ENST00000363426 164 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 RNVU1-6-201ENST00000364688 164 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.19□□□□□ -1.74
H3F3AP84243 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.19□□□□□ -1.74
H3F3AP84243 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 AC006466.1-201ENST00000438721 289 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 TDGF1P1-201ENST00000445734 527 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.19□□□□□ -1.74
H3F3AP84243 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 RPL36AP41-201ENST00000493820 306 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.19□□□□□ -1.74
H3F3AP84243 RN7SL690P-201ENST00000582087 240 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.19□□□□□ -1.74
H3F3AP84243 AC068790.7-201ENST00000602347 528 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AC073091.2-201ENST00000603205 907 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 RNF138P2-201ENST00000603490 592 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AC087283.1-201ENST00000604029 1074 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AC073137.1-201ENST00000605636 634 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.19□□□□□ -1.74
H3F3AP84243 AC092435.4-201ENST00000623012 4159 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3F3AP84243 AC135352.1-201ENST00000506173 1418 ntBASIC4.19□□□□□ -1.74
H3F3AP84243 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
H3F3AP84243 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
H3F3AP84243 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
H3F3AP84243 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 AC005332.5-201ENST00000591222 2919 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 OR56B2P-201ENST00000317102 954 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.18□□□□□ -1.74
H3F3AP84243 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
H3F3AP84243 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.18□□□□□ -1.74
H3F3AP84243 RPL7L1P1-201ENST00000448259 785 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 AL513533.1-201ENST00000453728 415 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 SBDSP1-204ENST00000453858 737 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 AL445433.1-201ENST00000457507 257 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 AC107015.1-201ENST00000466902 747 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.18□□□□□ -1.74
H3F3AP84243 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.18□□□□□ -1.74
H3F3AP84243 RNU2-30P-201ENST00000516209 141 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.18□□□□□ -1.74
H3F3AP84243 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 AL008729.2-201ENST00000606393 473 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 MIR6780A-201ENST00000615089 68 ntBASIC4.18□□□□□ -1.74
H3F3AP84243 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
H3F3AP84243 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.18□□□□□ -1.74
H3F3AP84243 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.18□□□□□ -1.74
H3F3AP84243 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3F3AP84243 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms