Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC110792.3-201ENST00000595906 1614 ntBASIC4.15□□□□□ -1.74
LMO4P61968 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LMO4P61968 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LMO4P61968 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 RNU11-201ENST00000387069 134 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL356057.1-202ENST00000402263 756 ntBASIC4.15□□□□□ -1.75
LMO4P61968 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 AL354868.1-201ENST00000417077 482 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC009506.2-201ENST00000420635 840 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL121882.1-201ENST00000422893 417 ntBASIC4.15□□□□□ -1.75
LMO4P61968 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.15□□□□□ -1.75
LMO4P61968 AC092634.2-201ENST00000428146 1010 ntBASIC4.15□□□□□ -1.75
LMO4P61968 COX6CP13-201ENST00000428703 226 ntBASIC4.15□□□□□ -1.75
LMO4P61968 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.15□□□□□ -1.75
LMO4P61968 NPM1P18-201ENST00000434232 732 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL645931.1-201ENST00000439737 410 ntBASIC4.15□□□□□ -1.75
LMO4P61968 RPS29P9-201ENST00000440360 171 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 ELOCP13-201ENST00000443934 329 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 MED28P3-201ENST00000444288 531 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 MTND2P8-201ENST00000450555 1025 ntBASIC4.15□□□□□ -1.75
LMO4P61968 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 RPS29P33-201ENST00000456717 146 ntBASIC4.15□□□□□ -1.75
LMO4P61968 DUXAP8-207ENST00000456786 622 ntBASIC4.15□□□□□ -1.75
LMO4P61968 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 AC090543.1-201ENST00000492168 485 ntBASIC4.15□□□□□ -1.75
LMO4P61968 RN7SL441P-201ENST00000492388 296 ntBASIC4.15□□□□□ -1.75
LMO4P61968 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 RPL5P23-201ENST00000496040 868 ntBASIC4.15□□□□□ -1.75
LMO4P61968 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.15□□□□□ -1.75
LMO4P61968 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.15□□□□□ -1.75
LMO4P61968 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.15□□□□□ -1.75
LMO4P61968 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.15□□□□□ -1.75
LMO4P61968 BNIP3P1-201ENST00000547295 580 ntBASIC4.15□□□□□ -1.75
LMO4P61968 UBE2FP2-201ENST00000566646 462 ntBASIC4.15□□□□□ -1.75
LMO4P61968 EIF1P5-201ENST00000585002 234 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC040904.1-201ENST00000590850 223 ntBASIC4.15□□□□□ -1.75
LMO4P61968 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 AF230666.2-201ENST00000602328 725 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL360012.1-201ENST00000602813 131 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AP004372.1-201ENST00000604842 844 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL450270.1-201ENST00000606160 391 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AL355802.4-201ENST00000607635 548 ntBASIC4.15□□□□□ -1.75
LMO4P61968 DUXAP10-204ENST00000612052 616 ntBASIC4.15□□□□□ -1.75
LMO4P61968 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 uc_338.18-201ENST00000615451 175 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC097460.3-201ENST00000623099 442 ntBASIC4.15□□□□□ -1.75
LMO4P61968 AC019226.2-201ENST00000625973 424 ntBASIC4.15□□□□□ -1.75
LMO4P61968 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.15□□□□□ -1.75
LMO4P61968 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.15□□□□□ -1.75
LMO4P61968 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LMO4P61968 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMO4P61968 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 AL121950.1-201ENST00000624993 2077 ntBASIC4.14□□□□□ -1.75
LMO4P61968 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMO4P61968 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMO4P61968 RN7SKP186-201ENST00000365371 303 ntBASIC4.14□□□□□ -1.75
LMO4P61968 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMO4P61968 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMO4P61968 RPL5P19-201ENST00000404228 893 ntBASIC4.14□□□□□ -1.75
LMO4P61968 GPS2P1-201ENST00000411761 986 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AL590139.1-201ENST00000416267 400 ntBASIC4.14□□□□□ -1.75
LMO4P61968 BTF3P9-201ENST00000418784 283 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 AC006065.1-201ENST00000422539 802 ntBASIC4.14□□□□□ -1.75
LMO4P61968 RPL23AP4-201ENST00000427757 463 ntBASIC4.14□□□□□ -1.75
LMO4P61968 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 Z99127.2-201ENST00000441426 334 ntBASIC4.14□□□□□ -1.75
LMO4P61968 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AC004980.3-201ENST00000447046 365 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.14□□□□□ -1.75
LMO4P61968 HMGB1P4-201ENST00000455362 567 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.14□□□□□ -1.75
LMO4P61968 AC091180.1-201ENST00000462104 372 ntBASIC4.14□□□□□ -1.75
LMO4P61968 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.14□□□□□ -1.75
LMO4P61968 AC010468.3-201ENST00000508225 458 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms