Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC138965.3-201ENST00000623875 498 ntBASIC3.56□□□□□ -1.84
CMC4P56277 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.56□□□□□ -1.84
CMC4P56277 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.56□□□□□ -1.84
CMC4P56277 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.56□□□□□ -1.84
CMC4P56277 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
CMC4P56277 AC132825.1-201ENST00000463573 2247 ntBASIC3.56□□□□□ -1.84
CMC4P56277 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CMC4P56277 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CMC4P56277 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 AL445487.1-201ENST00000415694 1580 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC007342.7-201ENST00000624610 2337 ntBASIC3.55□□□□□ -1.84
CMC4P56277 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CMC4P56277 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 IRF5P1-201ENST00000504852 2164 ntBASIC3.55□□□□□ -1.84
CMC4P56277 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CMC4P56277 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 RPL10P10-201ENST00000403509 664 ntBASIC3.55□□□□□ -1.84
CMC4P56277 RPS4XP9-201ENST00000405151 780 ntBASIC3.55□□□□□ -1.84
CMC4P56277 RN7SKP16-201ENST00000410180 299 ntBASIC3.55□□□□□ -1.84
CMC4P56277 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 AC007394.1-201ENST00000421941 531 ntBASIC3.55□□□□□ -1.84
CMC4P56277 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 RPL31P20-201ENST00000449593 360 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AL133244.1-201ENST00000456007 258 ntBASIC3.55□□□□□ -1.84
CMC4P56277 RPL23AP65-201ENST00000475608 468 ntBASIC3.55□□□□□ -1.84
CMC4P56277 RN7SL826P-201ENST00000479724 288 ntBASIC3.55□□□□□ -1.84
CMC4P56277 LARP7P4-201ENST00000481075 878 ntBASIC3.55□□□□□ -1.84
CMC4P56277 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC3.55□□□□□ -1.84
CMC4P56277 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 SEC11B-201ENST00000518383 499 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.55□□□□□ -1.84
CMC4P56277 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.55□□□□□ -1.84
CMC4P56277 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.55□□□□□ -1.84
CMC4P56277 OR8X1P-201ENST00000534542 869 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC005868.1-201ENST00000536421 331 ntBASIC3.55□□□□□ -1.84
CMC4P56277 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.55□□□□□ -1.84
CMC4P56277 EIF1AXP2-201ENST00000555940 413 ntBASIC3.55□□□□□ -1.84
CMC4P56277 OR1F2P-201ENST00000570470 933 ntBASIC3.55□□□□□ -1.84
CMC4P56277 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 AC009303.3-201ENST00000591103 736 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC010487.1-201ENST00000594408 1172 ntBASIC3.55□□□□□ -1.84
CMC4P56277 SNX6P1-201ENST00000601728 1224 ntBASIC3.55□□□□□ -1.84
CMC4P56277 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.55□□□□□ -1.84
CMC4P56277 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC019131.2-201ENST00000609071 870 ntBASIC3.55□□□□□ -1.84
CMC4P56277 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 MIR8069-1-201ENST00000616627 86 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AL121890.2-201ENST00000617644 465 ntBASIC3.55□□□□□ -1.84
CMC4P56277 RMST_5.1-201ENST00000618704 126 ntBASIC3.55□□□□□ -1.84
CMC4P56277 MIR8069-2-201ENST00000621412 86 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AP001784.1-201ENST00000624107 428 ntBASIC3.55□□□□□ -1.84
CMC4P56277 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
CMC4P56277 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.55□□□□□ -1.84
CMC4P56277 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.55□□□□□ -1.84
CMC4P56277 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.55□□□□□ -1.84
CMC4P56277 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 UGT2B26P-201ENST00000508672 1613 ntBASIC3.55□□□□□ -1.84
CMC4P56277 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CMC4P56277 AC019072.1-201ENST00000604535 1551 ntBASIC3.55□□□□□ -1.84
CMC4P56277 AC108467.2-201ENST00000617640 1597 ntBASIC3.55□□□□□ -1.84
CMC4P56277 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMC4P56277 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.54□□□□□ -1.84
CMC4P56277 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 AL731566.1-201ENST00000620490 1937 ntBASIC3.54□□□□□ -1.84
CMC4P56277 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 AL442639.1-201ENST00000625030 1899 ntBASIC3.54□□□□□ -1.84
CMC4P56277 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CMC4P56277 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 HSPA8P17-201ENST00000427029 1382 ntBASIC3.54□□□□□ -1.84
CMC4P56277 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 AP005435.3-201ENST00000531260 3198 ntBASIC3.54□□□□□ -1.84
CMC4P56277 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 AC108751.5-201ENST00000492880 1336 ntBASIC3.54□□□□□ -1.84
CMC4P56277 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.54□□□□□ -1.84
CMC4P56277 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CMC4P56277 RNU4-23P-201ENST00000362839 140 ntBASIC3.54□□□□□ -1.84
CMC4P56277 RNU6-1251P-201ENST00000364502 107 ntBASIC3.54□□□□□ -1.84
CMC4P56277 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMC4P56277 RNA5SP87-201ENST00000384155 118 ntBASIC3.54□□□□□ -1.84
CMC4P56277 RNU6-891P-201ENST00000384280 111 ntBASIC3.54□□□□□ -1.84
CMC4P56277 U3.30-201ENST00000391308 210 ntBASIC3.54□□□□□ -1.84
CMC4P56277 NPM1P37-201ENST00000403105 874 ntBASIC3.54□□□□□ -1.84
CMC4P56277 RN7SKP100-201ENST00000411258 284 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms