Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.9□□□□□ -1.63
CDH13P55290 QRSL1P2-201ENST00000418582 964 ntBASIC4.9□□□□□ -1.63
CDH13P55290 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 VN1R42P-201ENST00000424651 344 ntBASIC4.9□□□□□ -1.63
CDH13P55290 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 MTCO3P21-201ENST00000430791 643 ntBASIC4.9□□□□□ -1.63
CDH13P55290 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH13P55290 AL512661.1-201ENST00000434586 1253 ntBASIC4.9□□□□□ -1.63
CDH13P55290 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 HMGB1P4-201ENST00000455362 567 ntBASIC4.9□□□□□ -1.63
CDH13P55290 SETP20-201ENST00000457046 852 ntBASIC4.9□□□□□ -1.63
CDH13P55290 RNU7-27P-201ENST00000459281 62 ntBASIC4.9□□□□□ -1.63
CDH13P55290 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH13P55290 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH13P55290 AC016550.1-201ENST00000505348 785 ntBASIC4.9□□□□□ -1.63
CDH13P55290 HMGB3P16-201ENST00000508037 287 ntBASIC4.9□□□□□ -1.63
CDH13P55290 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 snoU109.6-201ENST00000516831 118 ntBASIC4.9□□□□□ -1.63
CDH13P55290 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH13P55290 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH13P55290 AC012339.2-201ENST00000523996 453 ntBASIC4.9□□□□□ -1.63
CDH13P55290 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.9□□□□□ -1.63
CDH13P55290 BNIP3P1-201ENST00000547295 580 ntBASIC4.9□□□□□ -1.63
CDH13P55290 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH13P55290 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 AC015914.2-201ENST00000618167 288 ntBASIC4.9□□□□□ -1.63
CDH13P55290 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH13P55290 AC095038.2-201ENST00000621464 1070 ntBASIC4.9□□□□□ -1.63
CDH13P55290 AC010435.1-201ENST00000623353 1177 ntBASIC4.9□□□□□ -1.63
CDH13P55290 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 PANDAR-201ENST00000629595 1506 ntBASIC4.9□□□□□ -1.63
CDH13P55290 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
CDH13P55290 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 AC093311.1-201ENST00000506586 2021 ntBASIC4.89□□□□□ -1.63
CDH13P55290 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH13P55290 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH13P55290 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 RNU6-452P-201ENST00000384406 107 ntBASIC4.89□□□□□ -1.63
CDH13P55290 SNORA70.10-201ENST00000384515 134 ntBASIC4.89□□□□□ -1.63
CDH13P55290 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH13P55290 LRRC37BP1-201ENST00000398851 714 ntBASIC4.89□□□□□ -1.63
CDH13P55290 DUTP5-201ENST00000406790 469 ntBASIC4.89□□□□□ -1.63
CDH13P55290 SNORA77-201ENST00000408716 125 ntBASIC4.89□□□□□ -1.63
CDH13P55290 RNU4-27P-201ENST00000410889 139 ntBASIC4.89□□□□□ -1.63
CDH13P55290 UBE2V1P11-201ENST00000411559 285 ntBASIC4.89□□□□□ -1.63
CDH13P55290 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 SETP15-201ENST00000412724 337 ntBASIC4.89□□□□□ -1.63
CDH13P55290 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.89□□□□□ -1.63
CDH13P55290 NPM1P22-201ENST00000427761 952 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH13P55290 AL512637.2-201ENST00000431287 1256 ntBASIC4.89□□□□□ -1.63
CDH13P55290 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 YWHAZP2-201ENST00000440317 728 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC073052.1-201ENST00000440417 714 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 SPRYD7P1-201ENST00000443861 570 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 AC069540.1-201ENST00000446320 988 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 SETP6-201ENST00000479329 568 ntBASIC4.89□□□□□ -1.63
CDH13P55290 RPL5P22-201ENST00000480199 884 ntBASIC4.89□□□□□ -1.63
CDH13P55290 UBA52P7-201ENST00000486088 380 ntBASIC4.89□□□□□ -1.63
CDH13P55290 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 AL136038.1-201ENST00000497246 351 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC010350.1-201ENST00000504908 231 ntBASIC4.89□□□□□ -1.63
CDH13P55290 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 AC138938.1-201ENST00000515431 782 ntBASIC4.89□□□□□ -1.63
CDH13P55290 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH13P55290 AL049779.2-201ENST00000553847 315 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC104229.1-201ENST00000561364 255 ntBASIC4.89□□□□□ -1.63
CDH13P55290 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH13P55290 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDH13P55290 MTATP6P2-201ENST00000603319 678 ntBASIC4.89□□□□□ -1.63
CDH13P55290 MIR6837-201ENST00000620884 64 ntBASIC4.89□□□□□ -1.63
CDH13P55290 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms