Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU2-22P-201ENST00000411266 212 ntBASIC5.12□□□□□ -1.59
LHX1P48742 SETP10-201ENST00000424368 814 ntBASIC5.12□□□□□ -1.59
LHX1P48742 HMGN2P27-201ENST00000427352 270 ntBASIC5.12□□□□□ -1.59
LHX1P48742 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 MTND2P21-201ENST00000436242 1042 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC245517.2-201ENST00000442890 346 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 AC021087.2-201ENST00000504656 1203 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 AC093770.1-201ENST00000511559 571 ntBASIC5.12□□□□□ -1.59
LHX1P48742 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 AC009852.2-201ENST00000567898 485 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.12□□□□□ -1.59
LHX1P48742 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 MTCO2P22-201ENST00000603246 681 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AP004372.1-201ENST00000604842 844 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC004241.3-201ENST00000611728 517 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC092159.4-201ENST00000624944 550 ntBASIC5.12□□□□□ -1.59
LHX1P48742 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LHX1P48742 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 SMG1P4-204ENST00000523028 4131 ntBASIC5.12□□□□□ -1.59
LHX1P48742 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 MIR137-201ENST00000385223 102 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-1320P-201ENST00000390838 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-1269P-201ENST00000391139 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RSU1P3-201ENST00000412878 835 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 AL590139.1-201ENST00000416267 400 ntBASIC5.11□□□□□ -1.59
LHX1P48742 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 AC016831.4-201ENST00000438302 307 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 AL513533.1-201ENST00000453728 415 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-599P-201ENST00000459383 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-1193P-201ENST00000459461 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 IGLV2-34-201ENST00000490007 283 ntBASIC5.11□□□□□ -1.59
LHX1P48742 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 AC005868.1-201ENST00000536421 331 ntBASIC5.11□□□□□ -1.59
LHX1P48742 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX1P48742 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.11□□□□□ -1.59
LHX1P48742 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 AC087283.1-201ENST00000604029 1074 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AL355802.4-201ENST00000607635 548 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AC019131.2-201ENST00000609071 870 ntBASIC5.11□□□□□ -1.59
LHX1P48742 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 MIR6780A-201ENST00000615089 68 ntBASIC5.11□□□□□ -1.59
LHX1P48742 MIR6853-201ENST00000619642 74 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-368P-201ENST00000620928 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 RNU6-538P-201ENST00000622329 107 ntBASIC5.11□□□□□ -1.59
LHX1P48742 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 ZFRP1-201ENST00000457579 2970 ntBASIC5.11□□□□□ -1.59
LHX1P48742 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX1P48742 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LHX1P48742 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX1P48742 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LHX1P48742 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LHX1P48742 RNU2-72P-201ENST00000411175 163 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX1P48742 BTF3P9-201ENST00000418784 283 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AL645608.4-201ENST00000423619 154 ntBASIC5.1□□□□□ -1.59
LHX1P48742 FABP7P2-201ENST00000429946 379 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AL359265.2-201ENST00000434367 631 ntBASIC5.1□□□□□ -1.59
LHX1P48742 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX1P48742 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX1P48742 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX1P48742 DDX18P5-201ENST00000534547 1306 ntBASIC5.1□□□□□ -1.59
LHX1P48742 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX1P48742 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.1□□□□□ -1.59
LHX1P48742 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX1P48742 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX1P48742 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX1P48742 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX1P48742 MIR4660-201ENST00000583549 74 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms