Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 AL137100.1-201ENST00000556703 1620 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 RNU6-152P-201ENST00000384037 107 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AL358178.1-201ENST00000407698 397 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 PTGES3P2-201ENST00000407942 482 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC6P09630 AC234779.1-201ENST00000425910 285 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC023141.6-201ENST00000429418 337 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 RPL12P28-201ENST00000430852 489 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC013410.1-201ENST00000436223 1232 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC6P09630 ATP5G1P3-201ENST00000463301 410 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC108729.1-201ENST00000487812 947 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC104971.1-201ENST00000495117 578 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 RN7SKP21-201ENST00000516503 220 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 SCARNA1-201ENST00000517138 166 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC6P09630 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 AC005191.1-201ENST00000603950 358 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC068313.1-201ENST00000604028 1008 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC6P09630 AC112503.2-201ENST00000609005 552 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC010872.1-201ENST00000624225 675 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC008993.2-201ENST00000631744 806 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 MIR6830-201ENST00000636015 70 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 GVINP1-202ENST00000531871 7271 ntBASIC5.53□□□□□ -1.52
HOXC6P09630 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC6P09630 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 AL627171.1-201ENST00000618845 1308 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AL592148.3-201ENST00000608771 2646 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXC6P09630 RN7SKP186-201ENST00000365371 303 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 MIR7-1-201ENST00000384871 110 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXC6P09630 DPPA2P2-201ENST00000418220 897 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXC6P09630 FABP7P1-201ENST00000424004 391 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 GTF2IP2-201ENST00000424290 697 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 MTCO2P17-201ENST00000424336 677 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC6P09630 PRPF38AP1-201ENST00000451976 933 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 OR52E3P-201ENST00000452083 936 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 MTND2P30-201ENST00000456663 382 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC012123.2-201ENST00000485809 248 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC093801.2-201ENST00000503966 1050 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXC6P09630 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXC6P09630 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXC6P09630 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXC6P09630 RN7SL802P-201ENST00000577858 299 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 RPL12P25-202ENST00000598100 674 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AL671309.1-201ENST00000603750 544 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC018645.2-201ENST00000609151 472 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC005962.2-201ENST00000611427 652 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC019206.1-201ENST00000621938 425 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 AC097372.4-201ENST00000625025 466 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXC6P09630 AC083837.1-201ENST00000565297 2994 ntBASIC5.52□□□□□ -1.53
HOXC6P09630 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC6P09630 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC6P09630 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC6P09630 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXC6P09630 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms