Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 HMGB3P10-201ENST00000434734 572 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL1P09341 PSMD10P3-201ENST00000437000 448 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 GSTA7P-201ENST00000438425 448 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 PTMAP3-201ENST00000447474 330 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC239809.1-201ENST00000450470 217 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC008410.1-201ENST00000483777 339 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL1P09341 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL1P09341 COX6B1P5-201ENST00000509843 249 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.55□□□□□ -1.84
CXCL1P09341 RNA5SP473-201ENST00000516402 125 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 NPM1P6-201ENST00000521088 871 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 OR7E128P-201ENST00000532736 1024 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC105254.2-201ENST00000603636 436 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 MIR6889-201ENST00000613185 59 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 MIR6837-201ENST00000620884 64 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC099494.2-201ENST00000623371 978 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CXCL1P09341 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CXCL1P09341 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 RNA5SP322-201ENST00000363617 119 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 RN7SKP160-201ENST00000363804 340 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CXCL1P09341 HSPD1P16-201ENST00000402302 394 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 TRIM60P17-201ENST00000415181 719 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 UBTFL3-201ENST00000418934 1024 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 PRELID3BP10-201ENST00000431957 584 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.54□□□□□ -1.84
CXCL1P09341 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 NDUFA5P8-201ENST00000449019 346 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC009127.1-201ENST00000467090 155 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 UBTFL6-201ENST00000477929 1024 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 RPL7P39-201ENST00000481157 744 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC025164.1-201ENST00000496249 478 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 RN7SKP70-201ENST00000516655 271 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC135626.1-201ENST00000556983 435 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL1P09341 AC141257.3-201ENST00000572906 215 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC011447.4-201ENST00000587562 111 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC087468.1-201ENST00000604365 630 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 AL121932.1-201ENST00000605542 214 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC007390.2-201ENST00000606229 3803 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC009779.8-202ENST00000607990 932 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC005840.5-201ENST00000619166 599 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AL022401.1-201ENST00000619498 108 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AL357153.4-201ENST00000620487 1016 ntBASIC3.54□□□□□ -1.84
CXCL1P09341 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.54□□□□□ -1.84
CXCL1P09341 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL1P09341 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CXCL1P09341 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL1P09341 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms