Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXD4P09016 RN7SL481P-201ENST00000477764 299 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 AC093267.1-201ENST00000489176 961 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 IGBP1P4-201ENST00000503202 879 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 AC104997.1-201ENST00000519761 717 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 AC008147.3-201ENST00000548666 354 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD4P09016 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD4P09016 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD4P09016 MIR4697-201ENST00000582977 78 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXD4P09016 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD4P09016 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXD4P09016 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD4P09016 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 AP002371.2-201ENST00000624450 503 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 AC080188.3-201ENST00000624842 748 ntBASIC4.57□□□□□ -1.68
HOXD4P09016 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HOXD4P09016 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD4P09016 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXD4P09016 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
HOXD4P09016 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXD4P09016 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HOXD4P09016 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXD4P09016 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 RN7SKP95-201ENST00000362860 303 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 RNU6-670P-201ENST00000364312 104 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 OR1L6-202ENST00000373684 1044 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 GAPDHP15-201ENST00000398586 975 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 CHEK2P3-201ENST00000416118 248 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 E2F6P2-201ENST00000420708 748 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXD4P09016 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXD4P09016 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 MTCO1P57-201ENST00000432182 261 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 ZFAND6P1-201ENST00000434138 605 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 SDR42E1P3-201ENST00000438345 502 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD4P09016 AC004980.3-201ENST00000447046 365 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 BX842559.2-201ENST00000451418 605 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 RN7SL319P-201ENST00000480656 221 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AC097173.1-201ENST00000505862 819 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 RN7SKP46-201ENST00000515942 234 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD4P09016 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 AC084759.1-201ENST00000561168 290 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 MIR4691-201ENST00000583764 85 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXD4P09016 AC108738.1-201ENST00000603703 237 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AC011626.1-201ENST00000604710 562 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AL161616.1-201ENST00000611867 286 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 MIR378J-201ENST00000611988 109 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 AC015914.2-201ENST00000618167 288 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 AC097461.1-201ENST00000568928 2821 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD4P09016 MTCO1P15-201ENST00000529569 1526 ntBASIC4.56□□□□□ -1.68
HOXD4P09016 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD4P09016 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
HOXD4P09016 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXD4P09016 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD4P09016 AC003973.3-201ENST00000624863 2822 ntBASIC4.55□□□□□ -1.68
HOXD4P09016 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD4P09016 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXD4P09016 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXD4P09016 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD4P09016 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD4P09016 RNA5SP428-201ENST00000365129 132 ntBASIC4.55□□□□□ -1.68
HOXD4P09016 RNA5SP223-201ENST00000365174 120 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms