Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 VPS35P1-201ENST00000563400 1518 ntBASIC4.74□□□□□ -1.65
SNX3O60493 RAD1P1-201ENST00000231383 813 ntBASIC4.74□□□□□ -1.65
SNX3O60493 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.74□□□□□ -1.65
SNX3O60493 TAF9BP2-201ENST00000400856 499 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AL357515.1-201ENST00000402967 542 ntBASIC4.74□□□□□ -1.65
SNX3O60493 MIR1275-201ENST00000408770 80 ntBASIC4.74□□□□□ -1.65
SNX3O60493 RN7SKP216-201ENST00000411050 312 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC093655.2-201ENST00000425735 631 ntBASIC4.74□□□□□ -1.65
SNX3O60493 DYNLL1P7-201ENST00000429273 258 ntBASIC4.74□□□□□ -1.65
SNX3O60493 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 SUMO2P3-201ENST00000438311 288 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX3O60493 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 AC021205.1-201ENST00000468797 348 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX3O60493 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 AC092349.1-201ENST00000504903 310 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 AC106806.2-201ENST00000509365 500 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 RNA5SP446-201ENST00000515955 82 ntBASIC4.74□□□□□ -1.65
SNX3O60493 IGLV3-26-201ENST00000520756 302 ntBASIC4.74□□□□□ -1.65
SNX3O60493 TRIM77BP-201ENST00000524985 1119 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 AC006512.2-201ENST00000543250 486 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 AC069240.1-201ENST00000548774 375 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 CR383656.14-201ENST00000551951 406 ntBASIC4.74□□□□□ -1.65
SNX3O60493 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX3O60493 AC026826.3-201ENST00000561747 158 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX3O60493 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 AC020978.7-201ENST00000575953 1187 ntBASIC4.74□□□□□ -1.65
SNX3O60493 SNORA74C-1-201ENST00000580726 201 ntBASIC4.74□□□□□ -1.65
SNX3O60493 MIR1273E-201ENST00000581165 102 ntBASIC4.74□□□□□ -1.65
SNX3O60493 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 AC010245.2-201ENST00000606908 1167 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC084824.5-201ENST00000612009 413 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AL591926.1-201ENST00000620542 217 ntBASIC4.74□□□□□ -1.65
SNX3O60493 MIR6806-201ENST00000622141 64 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC097460.3-201ENST00000623099 442 ntBASIC4.74□□□□□ -1.65
SNX3O60493 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SNX3O60493 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 KPNA2P2-201ENST00000419546 1489 ntBASIC4.74□□□□□ -1.65
SNX3O60493 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
SNX3O60493 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 RNA5SP52-201ENST00000362448 134 ntBASIC4.73□□□□□ -1.65
SNX3O60493 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNX3O60493 RNU6-244P-201ENST00000391028 104 ntBASIC4.73□□□□□ -1.65
SNX3O60493 CHMP1B2P-201ENST00000399581 597 ntBASIC4.73□□□□□ -1.65
SNX3O60493 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 LAP3P1-201ENST00000403648 294 ntBASIC4.73□□□□□ -1.65
SNX3O60493 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 RNU2-18P-201ENST00000411224 162 ntBASIC4.73□□□□□ -1.65
SNX3O60493 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNX3O60493 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNX3O60493 AC108075.1-201ENST00000424692 529 ntBASIC4.73□□□□□ -1.65
SNX3O60493 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 BX119904.1-201ENST00000432026 348 ntBASIC4.73□□□□□ -1.65
SNX3O60493 AL451139.1-201ENST00000434718 346 ntBASIC4.73□□□□□ -1.65
SNX3O60493 MTCYBP21-201ENST00000443300 1113 ntBASIC4.73□□□□□ -1.65
SNX3O60493 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.73□□□□□ -1.65
SNX3O60493 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 AC107398.1-201ENST00000486904 505 ntBASIC4.73□□□□□ -1.65
SNX3O60493 EIF1P7-201ENST00000487533 337 ntBASIC4.73□□□□□ -1.65
SNX3O60493 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.73□□□□□ -1.65
SNX3O60493 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX3O60493 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 OSBPL9P3-201ENST00000534523 595 ntBASIC4.73□□□□□ -1.65
SNX3O60493 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.73□□□□□ -1.65
SNX3O60493 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms