Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 RPL7AP28-201ENST00000464513 571 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC063943.1-201ENST00000465434 453 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AK4P6-201ENST00000505168 528 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.86□□□□□ -1.79
SDCBPO00560 AP000676.2-201ENST00000529711 301 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC009117.1-201ENST00000563948 554 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.86□□□□□ -1.79
SDCBPO00560 MIR4646-201ENST00000580775 63 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SDCBPO00560 AL031320.1-201ENST00000604177 357 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AL391358.1-201ENST00000605342 190 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC018445.2-201ENST00000622987 260 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC091905.2-201ENST00000623143 306 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.86□□□□□ -1.79
SDCBPO00560 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 AC006971.1-201ENST00000407916 4486 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SDCBPO00560 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC067945.1-201ENST00000342609 618 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 RNA5SP191-201ENST00000362585 102 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 MIR105-2-201ENST00000385083 81 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL645927.1-201ENST00000396783 406 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL050305.1-201ENST00000399993 1230 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 RN7SKP267-201ENST00000410381 285 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 OR51B3P-201ENST00000412287 913 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AC004690.1-201ENST00000418216 328 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 EIF4EP1-201ENST00000422311 642 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 GTF2IP2-201ENST00000424290 697 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 CENPIP1-201ENST00000425713 902 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 RPL23AP25-201ENST00000430973 463 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.85□□□□□ -1.79
SDCBPO00560 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.85□□□□□ -1.79
SDCBPO00560 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC090151.1-201ENST00000520784 730 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.85□□□□□ -1.79
SDCBPO00560 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SDCBPO00560 MTND6P33-201ENST00000571794 183 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL121834.1-201ENST00000572284 509 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 RN7SL652P-201ENST00000577769 300 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AC008759.1-201ENST00000589783 983 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL512782.1-201ENST00000603093 364 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AC103792.1-201ENST00000603591 919 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC090510.2-201ENST00000617465 629 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.85□□□□□ -1.79
SDCBPO00560 MIR7154-201ENST00000620673 73 ntBASIC3.85□□□□□ -1.79
SDCBPO00560 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SDCBPO00560 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.85□□□□□ -1.79
SDCBPO00560 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SDCBPO00560 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDCBPO00560 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.85□□□□□ -1.79
SDCBPO00560 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SDCBPO00560 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SDCBPO00560 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 AC112255.1-201ENST00000624070 2493 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 SDAD1P1-202ENST00000524156 2051 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 SNORA74A-201ENST00000364089 198 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 SNORA71.2-201ENST00000364941 134 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 RNA5SP113-201ENST00000410486 84 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms