Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL357562.1-201ENST00000624911 609 ntBASIC6.23□□□□□ -1.41
CCDC66A2RUB6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 AL022393.1-201ENST00000625142 1677 ntBASIC6.23□□□□□ -1.41
CCDC66A2RUB6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC66A2RUB6 AC104623.2-202ENST00000623477 4002 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RNU6-185P-201ENST00000384421 107 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RPL11P3-201ENST00000395256 523 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL132875.1-201ENST00000403623 949 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC105402.1-201ENST00000413336 545 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 TIMM9P2-201ENST00000419324 266 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC234781.4-201ENST00000419384 244 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL593851.1-201ENST00000426171 157 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL589823.1-201ENST00000429577 183 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC096775.1-201ENST00000437724 448 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 FTLP8-201ENST00000446770 267 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 MTCO3P16-201ENST00000454456 754 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC118758.1-202ENST00000454719 225 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RNA5SP103-201ENST00000459503 118 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 BZW1P2-201ENST00000473537 826 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC091959.2-201ENST00000477363 321 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC104108.1-201ENST00000509930 412 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC083923.1-201ENST00000523708 376 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC126615.2-201ENST00000553003 515 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 MIR3154-201ENST00000577829 84 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL590229.1-201ENST00000603497 542 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 DUXAP11-201ENST00000603858 526 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL031281.1-201ENST00000604049 488 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AC106791.2-201ENST00000604680 391 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 MIR6806-201ENST00000622141 64 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 SOCS5P3-201ENST00000425115 1576 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 ZNF542P-204ENST00000482727 1305 ntBASIC6.22□□□□□ -1.41
CCDC66A2RUB6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC66A2RUB6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC66A2RUB6 Z95331.1-201ENST00000623075 23112 ntBASIC6.21□□□□□ -1.41
CCDC66A2RUB6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC66A2RUB6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC66A2RUB6 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.21□□□□□ -1.41
CCDC66A2RUB6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC66A2RUB6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC66A2RUB6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC66A2RUB6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC66A2RUB6 TTC39DP-201ENST00000416781 1688 ntBASIC6.21□□□□□ -1.42
CCDC66A2RUB6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CCDC66A2RUB6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC66A2RUB6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms