Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 DDX39BP1-205ENST00000422507 192 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 EIF4HP2-201ENST00000424380 563 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AL157884.3-201ENST00000448273 1184 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SL517P-201ENST00000462240 305 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 HMGB3P26-201ENST00000560051 582 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC011447.4-201ENST00000587562 111 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 BMS1P7-201ENST00000602440 1052 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 MIR6862-1-201ENST00000613016 70 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 MIR6862-2-201ENST00000614755 70 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AL133268.1-201ENST00000405676 1401 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AL672167.1-205ENST00000641112 3080 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AL118496.1-201ENST00000440201 1812 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 MAPK10-320ENST00000641462 6696 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SNORA73.1-201ENST00000363107 205 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SNORA51.1-201ENST00000363243 140 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AL355433.1-201ENST00000422804 300 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC005033.1-201ENST00000428904 813 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 FABP7P2-201ENST00000429946 379 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 RPL34P20-201ENST00000442771 351 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC112206.1-201ENST00000468416 477 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 RPS26P39-201ENST00000469206 341 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 MTND6P6-201ENST00000478031 263 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SL244P-201ENST00000493405 297 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 COX6B1P5-201ENST00000509843 249 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 BTG4P1-201ENST00000510421 183 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC108471.1-201ENST00000513977 287 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SNORD116-26-201ENST00000516006 96 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 RNA5SP92-201ENST00000516437 110 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SEC11B-201ENST00000518383 499 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 OR7E128P-201ENST00000532736 1024 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 NMNAT1P1-201ENST00000554095 876 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 OR1F2P-201ENST00000570470 933 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 EIF1P5-201ENST00000585002 234 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 SUMO2P15-201ENST00000604285 278 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC117490.2-201ENST00000610042 594 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 CASC19-206ENST00000641028 1430 ntBASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RHBDD3Q9Y3P4 AC126323.6-202ENST00000568092 3511 ntBASIC4.28□□□□□ -1.73
RHBDD3Q9Y3P4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHBDD3Q9Y3P4 THAP12P4-201ENST00000528321 2266 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms