Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 AC025263.3-201ENST00000622965 1396 ntBASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 AP001284.1-201ENST00000528393 2118 ntBASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PPARGC1AQ9UBK2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC083837.1-201ENST00000565297 2994 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SELENOWP1-201ENST00000322792 252 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 IL6STP1-201ENST00000346911 1020 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 MIR525-201ENST00000384978 85 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SNRPEP6-201ENST00000407465 277 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC092745.2-202ENST00000411880 369 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AF274854.1-201ENST00000413236 615 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 MTCO1P21-201ENST00000416634 589 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC012519.1-201ENST00000424588 610 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC099677.3-201ENST00000427081 395 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 MGAT2P2-201ENST00000427194 797 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AP001324.1-201ENST00000428553 399 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL445928.1-201ENST00000435545 222 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 USP9YP22-201ENST00000438971 294 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 RPL23AP76-201ENST00000441860 458 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 GTF3AP5-201ENST00000442645 697 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC005002.1-201ENST00000447458 540 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 ACA64.4-201ENST00000459070 127 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 RN7SL193P-201ENST00000491708 276 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC109445.1-201ENST00000512356 383 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 HIGD1AP17-201ENST00000554576 276 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 RSL24D1P11-201ENST00000591045 491 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC239868.4-201ENST00000608318 671 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL139418.1-201ENST00000613613 177 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL355974.3-201ENST00000617383 467 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC129778.1-202ENST00000623812 261 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AL591379.1-207ENST00000635982 261 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 AC000095.2-202ENST00000637415 154 ntBASIC6.15□□□□□ -1.42
PPARGC1AQ9UBK2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 AC140134.1-201ENST00000511830 3544 ntBASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 AC073429.2-201ENST00000569694 1444 ntBASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
PPARGC1AQ9UBK2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 AC068870.3-201ENST00000625077 2536 ntBASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 AC123769.1-201ENST00000530992 3192 ntBASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 RNU6-666P-201ENST00000363499 107 ntBASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 OR5H15-201ENST00000383696 930 ntBASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 AC016739.1-201ENST00000405359 345 ntBASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.14□□□□□ -1.43
PPARGC1AQ9UBK2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms