Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC090017.1-201ENST00000548612 1779 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 CASC19-284ENST00000642142 1868 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AL451142.2-201ENST00000429076 2090 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC009313.2-201ENST00000417893 1941 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC006210.2-201ENST00000367074 1545 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC092079.1-201ENST00000558620 1985 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC079741.1-201ENST00000321498 212 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 MIR1271-201ENST00000408537 86 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RNA5SP113-201ENST00000410486 84 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC007738.1-201ENST00000413892 348 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC104333.2-201ENST00000422630 192 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RPS20P1-201ENST00000434853 354 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 TCEA1P1-201ENST00000449716 880 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC021205.1-201ENST00000468797 348 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RN7SL814P-201ENST00000487715 300 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RPL23AP72-201ENST00000492447 435 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC090312.1-201ENST00000580637 348 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 RN7SL435P-201ENST00000584418 282 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC012213.4-201ENST00000606457 354 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC131238.1-201ENST00000617135 328 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AL022322.2-201ENST00000624072 20397 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC010329.2-201ENST00000595195 2737 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 AC100778.3-201ENST00000580060 1750 ntBASIC4.99□□□□□ -1.61
TM9SF3Q9HD45 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 RNA5SP191-201ENST00000362585 102 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL034403.1-201ENST00000399414 885 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC012519.1-201ENST00000424588 610 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL158073.1-201ENST00000426848 1104 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 OR6C71P-201ENST00000432580 913 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 NPM1P33-201ENST00000438918 872 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL356390.1-201ENST00000455684 397 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 NIFKP7-201ENST00000503365 834 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 NPM1P35-201ENST00000533043 868 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC209154.1-201ENST00000582156 337 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 MIR4697-201ENST00000582977 78 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 EIF1P5-201ENST00000585002 234 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AC068790.4-201ENST00000602474 263 ntBASIC4.98□□□□□ -1.61
TM9SF3Q9HD45 AL391358.1-201ENST00000605342 190 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms