Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 UBBP2-201ENST00000376781 231 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 FTH1P16-201ENST00000435241 552 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AL161722.1-201ENST00000446972 1032 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RPL7AP52-201ENST00000458096 790 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 LSM3P2-201ENST00000551246 273 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 MIR3138-201ENST00000585238 82 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 OR2L1P-202ENST00000641567 1023 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 STX3-208ENST00000641815 3236 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 RAD17P1-201ENST00000418130 2042 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 UQCRBP1-201ENST00000421129 336 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AL732292.1-201ENST00000426692 226 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 MTND2P28-201ENST00000457540 1044 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC010326.1-201ENST00000462726 602 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AP002981.1-201ENST00000517692 975 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC009643.1-201ENST00000532030 391 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 TRAV8-5-201ENST00000537369 341 ntBASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KIAA1549Q9HCM3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 RPS16P5-201ENST00000406501 404 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 FHP1-201ENST00000442741 703 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC109327.1-201ENST00000471666 403 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC026402.1-201ENST00000513642 170 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC005191.1-201ENST00000603950 358 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 LINC00622-201ENST00000562811 1570 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC021146.4-201ENST00000309229 279 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 SNORA62-201ENST00000365493 153 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 MIR298-201ENST00000401212 88 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AL592293.2-201ENST00000422292 996 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 RPL7AP25-201ENST00000423357 805 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AL161747.1-201ENST00000480068 358 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms