Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC093890.1-201ENST00000502554 540 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AP004609.2-201ENST00000532177 190 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC122688.1-201ENST00000541494 223 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 ZNF321P-202ENST00000550843 495 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 NPM1P47-201ENST00000560843 856 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC009094.1-201ENST00000564443 426 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AP001269.3-201ENST00000588718 329 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AL451049.1-201ENST00000608672 497 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 TUSC7.1-201ENST00000610969 165 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 ABCC13-202ENST00000463099 3842 ntBASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM54Q9BYV2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 OR52B3P-201ENST00000314715 928 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 NACA3P-201ENST00000359690 648 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 RNU6-413P-201ENST00000384115 107 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AL079342.2-201ENST00000403367 482 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 GPS2P1-201ENST00000411761 986 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 OR5M12P-201ENST00000423388 929 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 DNAJA1P5-201ENST00000440278 943 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 RPL5P25-201ENST00000441148 775 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MTND2P22-201ENST00000444325 1033 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 IGBP1P3-201ENST00000447449 1000 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MRPL35P4-201ENST00000453682 566 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 USP9YP25-201ENST00000457708 443 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC091951.3-201ENST00000504093 246 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 DUTP7-201ENST00000507982 486 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC006499.4-201ENST00000510947 694 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MIR5708-201ENST00000579723 85 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AL499605.1-201ENST00000604628 403 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 MIR7973-1-201ENST00000614683 76 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 U6.48-201ENST00000618523 106 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AC078883.4-201ENST00000623218 367 ntBASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM54Q9BYV2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms