Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.36□□□□□ -1.55
VRK1Q99986 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK1Q99986 QRSL1P1-201ENST00000400977 1540 ntBASIC5.36□□□□□ -1.55
VRK1Q99986 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK1Q99986 DBF4P1-201ENST00000412976 1892 ntBASIC5.36□□□□□ -1.55
VRK1Q99986 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VRK1Q99986 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.36□□□□□ -1.55
VRK1Q99986 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VRK1Q99986 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VRK1Q99986 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 KYNUP3-201ENST00000574386 1341 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
VRK1Q99986 AL512646.1-201ENST00000269395 1077 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 SNORD1C-201ENST00000363315 78 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 Y_RNA.201-201ENST00000364052 96 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 RNU6-621P-201ENST00000364752 109 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AL096800.1-201ENST00000405326 893 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 HNRNPDP2-201ENST00000406475 478 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC019178.2-201ENST00000423595 505 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 RPSAP65-201ENST00000429660 595 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 RPL12P16-201ENST00000431098 498 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 PCBP2P1-201ENST00000437262 977 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 PPIAP17-201ENST00000438507 471 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC073648.4-201ENST00000442655 781 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AL034418.1-201ENST00000448675 860 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 MTND4LP3-201ENST00000468320 276 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
VRK1Q99986 RPS27P23-201ENST00000487608 251 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 OR2A20P-203ENST00000498397 1268 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC117532.1-201ENST00000514638 323 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 HNRNPKP5-201ENST00000515300 253 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC008429.4-201ENST00000521201 182 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 AC006530.1-201ENST00000555980 571 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.35□□□□□ -1.55
VRK1Q99986 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC068790.2-201ENST00000602601 557 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.35□□□□□ -1.55
VRK1Q99986 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AC015982.1-201ENST00000608113 465 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 AP001437.1-201ENST00000608783 456 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AL008723.3-201ENST00000608926 449 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC097505.1-201ENST00000610199 565 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC069234.4-201ENST00000621276 412 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 AC073530.2-201ENST00000623987 261 ntBASIC5.35□□□□□ -1.55
VRK1Q99986 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK1Q99986 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VRK1Q99986 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK1Q99986 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VRK1Q99986 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK1Q99986 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK1Q99986 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VRK1Q99986 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
VRK1Q99986 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK1Q99986 EIF3EP1-201ENST00000433978 1316 ntBASIC5.34□□□□□ -1.55
VRK1Q99986 AC109315.1-201ENST00000584143 1347 ntBASIC5.34□□□□□ -1.55
VRK1Q99986 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VRK1Q99986 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
VRK1Q99986 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms