Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC010928.1-201ENST00000592477 1447 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AL590240.1-201ENST00000334118 313 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 MIR550A3-201ENST00000390735 95 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 ATG4AP1-201ENST00000416893 538 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 RPL21P43-201ENST00000425440 472 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 Z80107.2-201ENST00000445127 392 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 THAP12P8-201ENST00000447914 2115 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 IGLV2-34-201ENST00000490007 283 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC011005.3-201ENST00000491624 395 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AP002981.1-201ENST00000517692 975 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 OR5D15P-201ENST00000531671 942 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 DUX4L52-201ENST00000549363 777 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC098935.2-201ENST00000604222 466 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AC097505.1-201ENST00000610199 565 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 AL158062.1-201ENST00000619632 745 ntBASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.8□□□□□ -1.64
CSPG4P5Q96PW8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 RPL36AP15-201ENST00000444514 266 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 OR52Y1P-201ENST00000452418 828 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 OR9N1P-201ENST00000491296 333 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC105233.1-201ENST00000498840 781 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC098799.3-201ENST00000506095 438 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AL121890.2-201ENST00000617644 465 ntBASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
CSPG4P5Q96PW8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-1320P-201ENST00000390838 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-1269P-201ENST00000391139 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 MIR921-201ENST00000401133 56 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 VN1R31P-201ENST00000417498 730 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-599P-201ENST00000459383 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-1193P-201ENST00000459461 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AC083982.1-201ENST00000485679 344 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AC231760.1-201ENST00000498002 260 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AK4P6-201ENST00000505168 528 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 OR5M2P-201ENST00000529003 936 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AP001804.2-201ENST00000533932 910 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AL121839.1-201ENST00000556233 1185 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-368P-201ENST00000620928 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RNU6-538P-201ENST00000622329 107 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 AC091953.3-201ENST00000623220 236 ntBASIC4.78□□□□□ -1.64
CSPG4P5Q96PW8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms