Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX1Q92499 AC073544.1-201ENST00000600110 1595 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC000367.1-201ENST00000452711 1766 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 VPS35P1-201ENST00000563400 1518 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
DDX1Q92499 OR52B3P-201ENST00000314715 928 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 SNORA58B-201ENST00000364259 136 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 AL590084.1-201ENST00000407885 387 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 ELOCP9-201ENST00000418624 239 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC022022.1-201ENST00000430304 178 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 MOB1AP1-201ENST00000430903 535 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC234064.1-201ENST00000436312 247 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC008629.2-201ENST00000503783 483 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 RNU6-720P-201ENST00000516363 108 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC112191.2-201ENST00000522428 333 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX1Q92499 AP002812.4-201ENST00000532139 286 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 PCNPP1-201ENST00000552501 511 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 RPA2P1-201ENST00000556557 721 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX1Q92499 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 MIR4489-201ENST00000578869 62 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.32□□□□□ -1.4
DDX1Q92499 DPRXP5-201ENST00000604662 539 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 AC073968.1-201ENST00000618594 637 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.32□□□□□ -1.4
DDX1Q92499 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DDX1Q92499 MSL3P1-202ENST00000440028 1468 ntBASIC6.32□□□□□ -1.4
DDX1Q92499 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
DDX1Q92499 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DDX1Q92499 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
DDX1Q92499 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 MTCO1P6-201ENST00000481192 1384 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 AC138393.1-206ENST00000540997 1886 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 SELENOWP1-201ENST00000322792 252 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 NACA3P-201ENST00000359690 648 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 RNU5E-4P-201ENST00000364931 120 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 RNU6-1283P-201ENST00000365314 105 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 RN7SKP292-201ENST00000365522 317 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 Y_RNA.559-201ENST00000384686 107 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 ERHP2-201ENST00000402323 299 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AL079342.2-201ENST00000403367 482 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
DDX1Q92499 OR3A2-201ENST00000408891 1076 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AL354890.1-201ENST00000413730 346 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 CDY14P-201ENST00000431260 1014 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 AL663074.2-201ENST00000440621 479 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 AC233982.1-201ENST00000451247 436 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 CDY23P-201ENST00000451661 1014 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AL445665.1-202ENST00000452436 324 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 OSTCP1-201ENST00000455507 450 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 PFN1P6-201ENST00000476786 399 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX1Q92499 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX1Q92499 AC060788.1-201ENST00000521318 469 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AC078899.1-201ENST00000521432 1185 ntBASIC6.31□□□□□ -1.4
DDX1Q92499 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX1Q92499 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms