Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC090525.3-201ENST00000605601 189 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 STMN1P1-201ENST00000617809 440 ntBASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC33Q8N5R6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ZNF29P-201ENST00000225587 168 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RNA5SP507-201ENST00000363603 121 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 SNORA62.2-201ENST00000364672 152 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RNU6-98P-201ENST00000384173 107 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 DNAJC19P6-201ENST00000401853 280 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RPL7P27-201ENST00000403775 720 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RN7SKP273-201ENST00000411392 314 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RPS3AP25-201ENST00000411660 793 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AL390774.1-201ENST00000411924 246 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC092638.1-201ENST00000411966 1275 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AL133482.1-201ENST00000415988 498 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 OR51A6P-201ENST00000418680 1004 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AL133325.1-201ENST00000421090 382 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RPL7P56-201ENST00000429441 717 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 OR6D1P-201ENST00000436165 939 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RPL6P9-201ENST00000466502 859 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RNA5SP303-201ENST00000516192 130 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 OR8G5-201ENST00000524943 1041 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC010503.3-201ENST00000594355 540 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC010487.1-201ENST00000594408 1172 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 Z82195.1-201ENST00000604558 398 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC000068.2-201ENST00000608816 460 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AL136295.6-201ENST00000610486 658 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC090510.2-201ENST00000617465 629 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AP000770.2-201ENST00000623694 100 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 AC002525.1-201ENST00000624392 1622 ntBASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC33Q8N5R6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 ENSAP3-201ENST00000312710 333 ntBASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 RPL23P2-201ENST00000320371 421 ntBASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC33Q8N5R6 ANAPC10P1-201ENST00000395991 556 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms