Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 BGLT3-201ENST00000564523 994 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC016180.1-201ENST00000567945 403 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC119501.1-201ENST00000603646 475 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AL391358.1-201ENST00000605342 190 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 MTCO1P22-201ENST00000604619 1360 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 SNORD96B-201ENST00000386148 79 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 OR51B3P-201ENST00000412287 913 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC073136.2-201ENST00000417282 849 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 PPIAP13-201ENST00000434706 478 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC098799.3-201ENST00000506095 438 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC110775.1-201ENST00000513721 462 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AF186190.1-201ENST00000517470 480 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC068870.2-201ENST00000620635 389 ntBASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL3Q8IVW4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 RN7SKP267-201ENST00000410381 285 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 VDAC1P9-201ENST00000412766 841 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL590609.2-201ENST00000421430 368 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 RPL21P43-201ENST00000425440 472 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 NRBF2P3-201ENST00000432731 865 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL627308.1-201ENST00000435693 821 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 RN7SL808P-201ENST00000496066 299 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC209154.1-201ENST00000582156 337 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC087468.1-201ENST00000604365 630 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC067838.1-201ENST00000606064 577 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL133406.3-201ENST00000606817 541 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL445222.1-201ENST00000607259 628 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AC004232.3-201ENST00000622977 525 ntBASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms