Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC119751.6-201ENST00000416712 186 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 MTCO1P43-201ENST00000431831 488 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 KNOP1P3-201ENST00000446933 426 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC073264.2-201ENST00000448886 166 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AL133244.1-201ENST00000456007 258 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 RPL21P47-201ENST00000483696 477 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC140172.1-201ENST00000502928 141 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 RNU6-1004P-201ENST00000516584 111 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 SNORA31.13-201ENST00000516624 135 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 BGLT3-201ENST00000564523 994 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 UBE2FP2-201ENST00000566646 462 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC133794.1-201ENST00000602731 914 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC104687.2-201ENST00000604442 342 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC018618.2-201ENST00000604770 446 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC024933.1-201ENST00000608472 348 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AP005229.2-201ENST00000609980 697 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC083809.1-201ENST00000615051 472 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 MIR6780A-201ENST00000615089 68 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC015712.7-201ENST00000615211 635 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC093875.1-201ENST00000623688 504 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC005618.4-201ENST00000625053 554 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC073869.8-201ENST00000641806 335 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 HSPD1P11-201ENST00000508643 1702 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 AL606537.1-201ENST00000607258 2011 ntBASIC5.67□□□□□ -1.5
HERC6Q8IVU3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HERC6Q8IVU3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 SNORA5.1-201ENST00000384275 131 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 MIR142-201ENST00000384835 87 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC008173.1-201ENST00000418901 264 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 REREP1Y-201ENST00000422655 198 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 NPM1P18-201ENST00000434232 732 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 REREP2Y-201ENST00000439103 200 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 MED28P3-201ENST00000444288 531 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC069540.1-201ENST00000446320 988 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 HMGB1P26-201ENST00000452520 628 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC068587.1-201ENST00000483613 781 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 IMPA1P1-201ENST00000510718 842 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC104229.1-201ENST00000561364 255 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 EIF1P5-201ENST00000585002 234 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 SDAD1P1-202ENST00000524156 2051 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 AC097461.1-201ENST00000568928 2821 ntBASIC5.66□□□□□ -1.5
HERC6Q8IVU3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HERC6Q8IVU3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HERC6Q8IVU3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms