Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 AL121594.5-201ENST00000631724 573 ntBASIC5.4□□□□□ -1.54
PTCHD3Q3KNS1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 AC007996.1-201ENST00000620414 2821 ntBASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 AL360270.2-201ENST00000562952 5985 ntBASIC5.4□□□□□ -1.55
PTCHD3Q3KNS1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ZNF876P-202ENST00000398732 1485 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC092681.1-201ENST00000297369 291 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ENSAP3-201ENST00000312710 333 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MIR133A2-201ENST00000347538 102 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 HMGB3P18-201ENST00000406327 590 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL034374.1-201ENST00000406329 351 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 RN7SKP278-201ENST00000410504 342 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 RN7SKP59-201ENST00000410520 314 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 BX510359.3-201ENST00000422168 306 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL365338.1-201ENST00000422282 858 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 OR5M12P-201ENST00000423388 929 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 TXNL1P1-201ENST00000429528 554 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 NANOGP2-201ENST00000435391 727 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL450996.1-201ENST00000445574 1202 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC023271.1-201ENST00000445936 1090 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 IGBP1P3-201ENST00000447449 1000 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 RBMY2TP-201ENST00000451162 947 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC005410.1-202ENST00000460347 485 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC107015.1-201ENST00000466902 747 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 RN7SL188P-201ENST00000469842 285 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC069528.1-202ENST00000482888 637 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC118465.1-201ENST00000513820 1271 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 IGKV2-18-201ENST00000522607 343 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC007834.2-201ENST00000536310 343 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC007349.4-201ENST00000608114 532 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL135786.2-201ENST00000608422 615 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AL139124.1-201ENST00000609123 421 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC009237.15-201ENST00000610252 501 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC092106.3-201ENST00000611308 722 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC024595.1-201ENST00000623088 387 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AC078883.4-201ENST00000623218 367 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 AP003399.1-201ENST00000637534 361 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 LINC02211-204ENST00000642024 1070 ntBASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCHD3Q3KNS1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms