Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RAE1P78406 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RAE1P78406 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RAE1P78406 OR1L6-202ENST00000373684 1044 ntBASIC5.12□□□□□ -1.59
RAE1P78406 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 MIR320B1-201ENST00000390209 79 ntBASIC5.12□□□□□ -1.59
RAE1P78406 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.12□□□□□ -1.59
RAE1P78406 AC104297.1-201ENST00000393779 870 ntBASIC5.12□□□□□ -1.59
RAE1P78406 OR4K12P-201ENST00000406538 961 ntBASIC5.12□□□□□ -1.59
RAE1P78406 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
RAE1P78406 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 KCTD9P1-201ENST00000430462 1167 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 GSTM5P1-201ENST00000434751 660 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 ARL5AP2-201ENST00000444698 533 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC073909.1-201ENST00000447112 999 ntBASIC5.12□□□□□ -1.59
RAE1P78406 RANP1-206ENST00000455094 651 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AC110749.1-201ENST00000462007 357 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 HMGB1P44-201ENST00000508597 572 ntBASIC5.12□□□□□ -1.59
RAE1P78406 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 AC083923.1-201ENST00000523708 376 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
RAE1P78406 RNA5SP440-201ENST00000612665 119 ntBASIC5.12□□□□□ -1.59
RAE1P78406 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 AC024595.1-201ENST00000623088 387 ntBASIC5.12□□□□□ -1.59
RAE1P78406 AC078883.4-201ENST00000623218 367 ntBASIC5.12□□□□□ -1.59
RAE1P78406 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RAE1P78406 MTND4P10-201ENST00000446199 1363 ntBASIC5.12□□□□□ -1.59
RAE1P78406 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.12□□□□□ -1.59
RAE1P78406 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.12□□□□□ -1.59
RAE1P78406 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.12□□□□□ -1.59
RAE1P78406 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RAE1P78406 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAE1P78406 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.11□□□□□ -1.59
RAE1P78406 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAE1P78406 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAE1P78406 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 MIR621-201ENST00000384919 96 ntBASIC5.11□□□□□ -1.59
RAE1P78406 MIR137-201ENST00000385223 102 ntBASIC5.11□□□□□ -1.59
RAE1P78406 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 AL133388.1-201ENST00000404509 287 ntBASIC5.11□□□□□ -1.59
RAE1P78406 Z93019.1-201ENST00000416450 973 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 AC124944.2-201ENST00000429866 1242 ntBASIC5.11□□□□□ -1.59
RAE1P78406 FTH1P16-201ENST00000435241 552 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC012075.1-201ENST00000436549 580 ntBASIC5.11□□□□□ -1.59
RAE1P78406 RPL7P29-201ENST00000437151 728 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AL138899.2-201ENST00000439139 499 ntBASIC5.11□□□□□ -1.59
RAE1P78406 ARAFP2-201ENST00000440565 559 ntBASIC5.11□□□□□ -1.59
RAE1P78406 RPS10P18-201ENST00000442662 495 ntBASIC5.11□□□□□ -1.59
RAE1P78406 CYCSP51-201ENST00000443545 318 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 PTENP1-201ENST00000447117 1215 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC105399.1-202ENST00000447303 205 ntBASIC5.11□□□□□ -1.59
RAE1P78406 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 CBX1P2-201ENST00000453841 458 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
RAE1P78406 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 RPS27AP2-201ENST00000457576 465 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms