Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 KNOP1P3-201ENST00000446933 426 ntBASIC4.14□□□□□ -1.75
UBA52P62987 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
UBA52P62987 IGLV2-34-201ENST00000490007 283 ntBASIC4.14□□□□□ -1.75
UBA52P62987 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 RN7SL244P-201ENST00000493405 297 ntBASIC4.14□□□□□ -1.75
UBA52P62987 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.14□□□□□ -1.75
UBA52P62987 AC097173.1-201ENST00000505862 819 ntBASIC4.14□□□□□ -1.75
UBA52P62987 RNA5SP392-201ENST00000516905 112 ntBASIC4.14□□□□□ -1.75
UBA52P62987 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 OR7E128P-201ENST00000532736 1024 ntBASIC4.14□□□□□ -1.75
UBA52P62987 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 AC018552.1-201ENST00000562099 811 ntBASIC4.14□□□□□ -1.75
UBA52P62987 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 MIR4737-201ENST00000583979 81 ntBASIC4.14□□□□□ -1.75
UBA52P62987 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.14□□□□□ -1.75
UBA52P62987 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 SLC25A36P1-201ENST00000590111 465 ntBASIC4.14□□□□□ -1.75
UBA52P62987 AC008814.1-201ENST00000603797 406 ntBASIC4.14□□□□□ -1.75
UBA52P62987 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.14□□□□□ -1.75
UBA52P62987 MTCO1P15-201ENST00000529569 1526 ntBASIC4.14□□□□□ -1.75
UBA52P62987 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
UBA52P62987 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.13□□□□□ -1.75
UBA52P62987 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 RNA5SP428-201ENST00000365129 132 ntBASIC4.13□□□□□ -1.75
UBA52P62987 Z97832.1-201ENST00000402490 328 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AP002530.1-201ENST00000405705 684 ntBASIC4.13□□□□□ -1.75
UBA52P62987 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 RN7SKP114-201ENST00000410327 279 ntBASIC4.13□□□□□ -1.75
UBA52P62987 RNU2-50P-201ENST00000410494 143 ntBASIC4.13□□□□□ -1.75
UBA52P62987 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 RHOT1P3-201ENST00000436571 331 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC011753.3-201ENST00000443436 406 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 NDUFA12P1-201ENST00000455914 406 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC006967.1-201ENST00000467608 589 ntBASIC4.13□□□□□ -1.75
UBA52P62987 NDUFA5P9-201ENST00000472609 340 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.13□□□□□ -1.75
UBA52P62987 RN7SL459P-201ENST00000481078 302 ntBASIC4.13□□□□□ -1.75
UBA52P62987 RN7SL441P-201ENST00000492388 296 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 COX6B1P5-201ENST00000509843 249 ntBASIC4.13□□□□□ -1.75
UBA52P62987 BTF3P13-201ENST00000513224 490 ntBASIC4.13□□□□□ -1.75
UBA52P62987 OR7H2P-201ENST00000513483 306 ntBASIC4.13□□□□□ -1.75
UBA52P62987 RNA5SP154-201ENST00000516193 111 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.13□□□□□ -1.75
UBA52P62987 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 DYNLL1P4-201ENST00000549314 266 ntBASIC4.13□□□□□ -1.75
UBA52P62987 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 BGLT3-201ENST00000564523 994 ntBASIC4.13□□□□□ -1.75
UBA52P62987 MTND6P33-201ENST00000571794 183 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.13□□□□□ -1.75
UBA52P62987 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.13□□□□□ -1.75
UBA52P62987 AL669942.2-201ENST00000620352 697 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AP000346.3-201ENST00000622821 210 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AL592182.3-201ENST00000642132 3304 ntBASIC4.13□□□□□ -1.75
UBA52P62987 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
UBA52P62987 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBA52P62987 AL672167.1-203ENST00000641299 2975 ntBASIC4.13□□□□□ -1.75
UBA52P62987 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.13□□□□□ -1.75
UBA52P62987 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.13□□□□□ -1.75
UBA52P62987 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
UBA52P62987 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBA52P62987 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 ECM1P2-201ENST00000503354 1577 ntBASIC4.12□□□□□ -1.75
UBA52P62987 RNU6-398P-201ENST00000384143 109 ntBASIC4.12□□□□□ -1.75
UBA52P62987 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms