Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AL158053.1-201ENST00000441503 453 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 EIF4A1P11-201ENST00000451239 222 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.18□□□□□ -1.42
RHBDL3P58872 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.18□□□□□ -1.42
RHBDL3P58872 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
RHBDL3P58872 RFPL4AP5-201ENST00000514977 504 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC008033.2-201ENST00000542626 177 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AC006116.7-201ENST00000590141 756 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC025857.2-201ENST00000602711 238 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC125494.3-201ENST00000602759 455 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 STMN1P1-201ENST00000617809 440 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC091905.4-201ENST00000623432 202 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 AC103798.2-201ENST00000624292 632 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDL3P58872 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDL3P58872 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 AC017007.4-201ENST00000503353 1352 ntBASIC6.18□□□□□ -1.42
RHBDL3P58872 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDL3P58872 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RHBDL3P58872 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RHBDL3P58872 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC083843.2-201ENST00000568248 6253 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 OR52E6-202ENST00000379946 954 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 RNU6-98P-201ENST00000384173 107 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 SNORA68.2-201ENST00000391263 128 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 RN7SKP17-201ENST00000411242 351 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AL139128.1-201ENST00000413921 941 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDL3P58872 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 OR2AM1P-201ENST00000422137 422 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDL3P58872 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 AL049745.1-201ENST00000433953 286 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC099670.2-201ENST00000435130 321 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AL359265.1-201ENST00000440296 795 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 snoU13.20-201ENST00000459180 104 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDL3P58872 OR8Q1P-201ENST00000526467 655 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC068339.2-201ENST00000534395 618 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDL3P58872 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC104072.1-201ENST00000568817 668 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 MIR3934-201ENST00000579806 107 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDL3P58872 ABI1P1-201ENST00000603375 1120 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AL355816.1-201ENST00000607951 118 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 MIR6748-201ENST00000610433 71 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 MIR6133-201ENST00000617057 108 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC116563.2-201ENST00000624751 535 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC106858.1-201ENST00000637497 429 ntBASIC6.17□□□□□ -1.42
RHBDL3P58872 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDL3P58872 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RHBDL3P58872 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDL3P58872 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RHBDL3P58872 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RHBDL3P58872 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RHBDL3P58872 OR9G4-201ENST00000302957 984 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms