Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MRE11P49959 RNA5SP110-201ENST00000362638 115 ntBASIC6.42□□□□□ -1.38
MRE11P49959 RNA5SP507-201ENST00000363603 121 ntBASIC6.42□□□□□ -1.38
MRE11P49959 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 EI24P3-201ENST00000399046 1062 ntBASIC6.42□□□□□ -1.38
MRE11P49959 SNORA11C-201ENST00000408532 129 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MIR1203-201ENST00000408812 85 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.42□□□□□ -1.38
MRE11P49959 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.42□□□□□ -1.38
MRE11P49959 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.42□□□□□ -1.38
MRE11P49959 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MRE11P49959 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 AL606490.7-201ENST00000433136 191 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MTCO3P5-201ENST00000433620 714 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 THAP5P1-201ENST00000439089 262 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC023141.8-201ENST00000442554 208 ntBASIC6.42□□□□□ -1.38
MRE11P49959 SPRYD7P1-201ENST00000443861 570 ntBASIC6.42□□□□□ -1.38
MRE11P49959 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.42□□□□□ -1.38
MRE11P49959 AP000797.2-201ENST00000475768 606 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.42□□□□□ -1.38
MRE11P49959 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.42□□□□□ -1.38
MRE11P49959 AC008629.2-201ENST00000503783 483 ntBASIC6.42□□□□□ -1.38
MRE11P49959 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.42□□□□□ -1.38
MRE11P49959 OR7E128P-201ENST00000532736 1024 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.42□□□□□ -1.38
MRE11P49959 AC025918.2-201ENST00000558683 763 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC009094.1-201ENST00000564443 426 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC090236.2-201ENST00000587933 1101 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.42□□□□□ -1.38
MRE11P49959 CCDC58P3-201ENST00000590792 430 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AP001823.1-201ENST00000604056 1003 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AL645933.2-201ENST00000606743 1207 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC108673.3-201ENST00000609183 335 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MIR378J-201ENST00000611988 109 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AC009318.3-201ENST00000616916 503 ntBASIC6.42□□□□□ -1.38
MRE11P49959 AP001784.1-201ENST00000624107 428 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.42□□□□□ -1.38
MRE11P49959 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.42□□□□□ -1.38
MRE11P49959 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.42□□□□□ -1.38
MRE11P49959 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MRE11P49959 Z98755.1-201ENST00000407015 1384 ntBASIC6.42□□□□□ -1.38
MRE11P49959 MTND4P5-201ENST00000435821 1374 ntBASIC6.42□□□□□ -1.38
MRE11P49959 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
MRE11P49959 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 AC023421.1-201ENST00000590535 1785 ntBASIC6.41□□□□□ -1.38
MRE11P49959 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 RAD1P1-201ENST00000231383 813 ntBASIC6.41□□□□□ -1.38
MRE11P49959 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 MIR1286-201ENST00000408112 78 ntBASIC6.41□□□□□ -1.38
MRE11P49959 RPL12P9-201ENST00000412942 488 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.41□□□□□ -1.38
MRE11P49959 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 RPL19P16-201ENST00000433839 588 ntBASIC6.41□□□□□ -1.38
MRE11P49959 NDUFS5P5-201ENST00000437256 321 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 MTCO2P3-201ENST00000442543 421 ntBASIC6.41□□□□□ -1.38
MRE11P49959 GTF3AP5-201ENST00000442645 697 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC245517.2-201ENST00000442890 346 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.41□□□□□ -1.38
MRE11P49959 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 RNA5SP103-201ENST00000459503 118 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AL157777.1-201ENST00000468100 304 ntBASIC6.41□□□□□ -1.38
MRE11P49959 DUTP1-201ENST00000493631 470 ntBASIC6.41□□□□□ -1.38
MRE11P49959 HMGB1P3-201ENST00000502802 616 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 Y_RNA.655-201ENST00000515919 96 ntBASIC6.41□□□□□ -1.38
MRE11P49959 RN7SKP66-201ENST00000516681 231 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms