Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 AC134698.5-201ENST00000519444 336 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.81□□□□□ -1.64
FDFT1P37268 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 HMGN2P6-201ENST00000551091 273 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.81□□□□□ -1.64
FDFT1P37268 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.81□□□□□ -1.64
FDFT1P37268 AC233280.2-201ENST00000603917 1070 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 AC004241.3-201ENST00000611728 517 ntBASIC4.81□□□□□ -1.64
FDFT1P37268 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.81□□□□□ -1.64
FDFT1P37268 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
FDFT1P37268 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.81□□□□□ -1.64
FDFT1P37268 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.81□□□□□ -1.64
FDFT1P37268 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.81□□□□□ -1.64
FDFT1P37268 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
FDFT1P37268 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FDFT1P37268 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
FDFT1P37268 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.8□□□□□ -1.64
FDFT1P37268 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.8□□□□□ -1.64
FDFT1P37268 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 SAMMSON-226ENST00000642089 1582 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 RNA5SP507-201ENST00000363603 121 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 SNORD96B-201ENST00000386148 79 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FDFT1P37268 RNU1-82P-201ENST00000390851 165 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 VDAC2P1-201ENST00000399358 958 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 RN7SKP229-201ENST00000410465 302 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
FDFT1P37268 OR2AM1P-201ENST00000422137 422 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 ARL4AP3-201ENST00000441452 574 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.8□□□□□ -1.64
FDFT1P37268 AL591623.2-201ENST00000449978 222 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC010733.1-201ENST00000451515 401 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AL133244.1-201ENST00000456007 258 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC090142.1-201ENST00000465776 462 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.8□□□□□ -1.64
FDFT1P37268 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.8□□□□□ -1.64
FDFT1P37268 RPS4XP18-201ENST00000495480 763 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 AC113398.2-201ENST00000507630 558 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC147055.3-201ENST00000510547 851 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.8□□□□□ -1.64
FDFT1P37268 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.8□□□□□ -1.64
FDFT1P37268 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.8□□□□□ -1.64
FDFT1P37268 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.8□□□□□ -1.64
FDFT1P37268 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.8□□□□□ -1.64
FDFT1P37268 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.8□□□□□ -1.64
FDFT1P37268 AC015912.2-201ENST00000571053 181 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 AC124856.1-201ENST00000600819 896 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 OR7A19P-201ENST00000608051 733 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 MIR6862-1-201ENST00000613016 70 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 MIR6862-2-201ENST00000614755 70 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 MIR6729-201ENST00000618194 65 ntBASIC4.8□□□□□ -1.64
FDFT1P37268 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.8□□□□□ -1.64
FDFT1P37268 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FDFT1P37268 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
FDFT1P37268 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FDFT1P37268 AL442639.1-201ENST00000625030 1899 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 CR788268.1-201ENST00000603931 1809 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 CIR1P2-201ENST00000514821 1342 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RN7SKP104-201ENST00000362605 328 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RNU1-94P-201ENST00000362627 173 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RN7SKP115-201ENST00000363177 317 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RNA5SP123-201ENST00000363244 119 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RNU4-34P-201ENST00000410431 124 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RNA5SP146-201ENST00000410743 123 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 DPPA2P3-201ENST00000411853 655 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 VDAC1P9-201ENST00000412766 841 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.79□□□□□ -1.64
FDFT1P37268 RPL23AP27-201ENST00000415161 451 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 Z74021.1-201ENST00000423610 407 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AC007559.1-201ENST00000428736 355 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 PPIAP13-201ENST00000434706 478 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AP000936.3-201ENST00000438127 255 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AC079168.2-201ENST00000453977 416 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 snoU13.20-201ENST00000459180 104 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AC004815.1-201ENST00000484185 331 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 RN7SL629P-201ENST00000489622 285 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FDFT1P37268 SCARNA22-201ENST00000503991 125 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.79□□□□□ -1.64
FDFT1P37268 BTF3P13-201ENST00000513224 490 ntBASIC4.79□□□□□ -1.64
FDFT1P37268 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.79□□□□□ -1.64
FDFT1P37268 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.79□□□□□ -1.64
FDFT1P37268 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.79□□□□□ -1.64
FDFT1P37268 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.79□□□□□ -1.64
FDFT1P37268 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms