Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 KARSP3-201ENST00000571212 1504 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 OR7E156P-201ENST00000400303 464 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC019050.1-201ENST00000418508 492 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 RPS3P2-201ENST00000421346 701 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC093084.1-201ENST00000424233 687 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC079807.1-201ENST00000429993 481 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 CLNS1AP1-201ENST00000435954 682 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 SERPINA7P1-201ENST00000443077 631 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AL354714.3-201ENST00000447284 493 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 IGHV5-78-201ENST00000450948 295 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC092349.1-201ENST00000504903 310 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 IFITM8P-201ENST00000522529 394 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 NANOGNBP2-201ENST00000544753 553 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC100767.2-201ENST00000604840 693 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AL359757.1-201ENST00000623176 255 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 AC087821.1-201ENST00000623639 567 ntBASIC4.11□□□□□ -1.75
HLA-DMAP28067 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DMAP28067 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DMAP28067 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC114546.3-201ENST00000623582 1734 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 RNU6-146P-201ENST00000384602 108 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RNU6-603P-201ENST00000411403 107 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RPL12P34-201ENST00000424532 479 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 RPS26P41-201ENST00000450370 284 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 OR52E7P-201ENST00000452394 933 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 YWHAEP1-201ENST00000453697 763 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC009127.1-201ENST00000467090 155 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 RN7SL170P-201ENST00000487098 295 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RPS21P4-201ENST00000487122 248 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RPS26P15-201ENST00000488067 348 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RN7SL547P-201ENST00000490793 290 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 SNORD46.2-201ENST00000516021 102 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 RNU6-709P-201ENST00000517257 104 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC124068.1-201ENST00000563131 678 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 SNORA74C-1-201ENST00000580726 201 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 EIF1P5-201ENST00000585002 234 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC008536.1-201ENST00000602872 669 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC109309.2-201ENST00000612597 332 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC243960.7-201ENST00000623532 707 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AL691477.1-201ENST00000624398 162 ntBASIC4.1□□□□□ -1.75
HLA-DMAP28067 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms