Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYCSP40-201ENST00000575927 294 ntBASIC5.56□□□□□ -1.52
TOP1P11387 RN7SL690P-201ENST00000582087 240 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP1P11387 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.56□□□□□ -1.52
TOP1P11387 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.56□□□□□ -1.52
TOP1P11387 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.56□□□□□ -1.52
TOP1P11387 AL133406.3-201ENST00000606817 541 ntBASIC5.56□□□□□ -1.52
TOP1P11387 uc_338.18-201ENST00000615451 175 ntBASIC5.56□□□□□ -1.52
TOP1P11387 AL121890.2-201ENST00000617644 465 ntBASIC5.56□□□□□ -1.52
TOP1P11387 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
TOP1P11387 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP1P11387 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 SALL4P2-201ENST00000423288 2910 ntBASIC5.55□□□□□ -1.52
TOP1P11387 SOCS5P3-201ENST00000425115 1576 ntBASIC5.55□□□□□ -1.52
TOP1P11387 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 RN7SKP115-201ENST00000363177 317 ntBASIC5.55□□□□□ -1.52
TOP1P11387 RNU6-1263P-201ENST00000384601 106 ntBASIC5.55□□□□□ -1.52
TOP1P11387 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TOP1P11387 AC233289.1-201ENST00000403700 508 ntBASIC5.55□□□□□ -1.52
TOP1P11387 OR51A6P-201ENST00000418680 1004 ntBASIC5.55□□□□□ -1.52
TOP1P11387 VN1R37P-201ENST00000419096 748 ntBASIC5.55□□□□□ -1.52
TOP1P11387 RGS17P1-201ENST00000423358 553 ntBASIC5.55□□□□□ -1.52
TOP1P11387 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.55□□□□□ -1.52
TOP1P11387 AC011753.3-201ENST00000443436 406 ntBASIC5.55□□□□□ -1.52
TOP1P11387 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.55□□□□□ -1.52
TOP1P11387 AC090686.1-201ENST00000481577 749 ntBASIC5.55□□□□□ -1.52
TOP1P11387 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.55□□□□□ -1.52
TOP1P11387 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.55□□□□□ -1.52
TOP1P11387 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.55□□□□□ -1.52
TOP1P11387 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.55□□□□□ -1.52
TOP1P11387 OR5M2P-201ENST00000529003 936 ntBASIC5.55□□□□□ -1.52
TOP1P11387 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.55□□□□□ -1.52
TOP1P11387 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TOP1P11387 SETP1-201ENST00000556014 845 ntBASIC5.55□□□□□ -1.52
TOP1P11387 MIR4330-201ENST00000579077 105 ntBASIC5.55□□□□□ -1.52
TOP1P11387 VN1R81P-201ENST00000602085 372 ntBASIC5.55□□□□□ -1.52
TOP1P11387 AP001005.3-201ENST00000622049 129 ntBASIC5.55□□□□□ -1.52
TOP1P11387 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.55□□□□□ -1.52
TOP1P11387 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP1P11387 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP1P11387 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.54□□□□□ -1.52
TOP1P11387 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP1P11387 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 RNU6-398P-201ENST00000384143 109 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL591848.1-201ENST00000413092 322 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AC098592.2-201ENST00000413158 265 ntBASIC5.54□□□□□ -1.52
TOP1P11387 SMC4P1-201ENST00000414479 527 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 AC092570.3-201ENST00000420113 693 ntBASIC5.54□□□□□ -1.52
TOP1P11387 EIF4A1P1-201ENST00000420241 934 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AC097523.2-201ENST00000435551 652 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 CEACAMP9-201ENST00000442990 513 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP1P11387 AC079168.2-201ENST00000453977 416 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.54□□□□□ -1.52
TOP1P11387 CYCSP34-201ENST00000458172 304 ntBASIC5.54□□□□□ -1.52
TOP1P11387 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 AC025423.2-201ENST00000537570 439 ntBASIC5.54□□□□□ -1.52
TOP1P11387 FKBP1BP1-201ENST00000553366 325 ntBASIC5.54□□□□□ -1.52
TOP1P11387 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TOP1P11387 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.54□□□□□ -1.52
TOP1P11387 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 RN7SL652P-201ENST00000577769 300 ntBASIC5.54□□□□□ -1.52
TOP1P11387 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.54□□□□□ -1.52
TOP1P11387 AC234771.5-201ENST00000600161 514 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP1P11387 MIR6748-201ENST00000610433 71 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.54□□□□□ -1.52
TOP1P11387 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.54□□□□□ -1.52
TOP1P11387 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.54□□□□□ -1.52
TOP1P11387 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.54□□□□□ -1.52
TOP1P11387 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 HCFC2P1-201ENST00000392864 1592 ntBASIC5.54□□□□□ -1.52
TOP1P11387 AL034370.1-201ENST00000397254 1590 ntBASIC5.54□□□□□ -1.52
TOP1P11387 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TOP1P11387 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms