Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 AC092447.7-201ENST00000422212 1621 ntBASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC087359.1-201ENST00000508335 1740 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 ANKRD20A10P-201ENST00000457591 1515 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 MAPK10-287ENST00000641217 3037 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 NSRP1P1-201ENST00000444067 1693 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 RNY4P24-201ENST00000362735 96 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 MIR433-201ENST00000384837 93 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC093719.1-202ENST00000392735 373 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 RNU2-66P-201ENST00000410650 161 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL139421.1-201ENST00000423010 169 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 NANOGP4-201ENST00000427230 913 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 RPL23AP76-201ENST00000441860 458 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL163193.1-201ENST00000444895 788 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC114728.1-201ENST00000488289 483 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 COX6B1P2-201ENST00000489624 230 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 RN7SL466P-201ENST00000497546 295 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC074344.1-201ENST00000512823 224 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 DPPA2P4-201ENST00000563717 878 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC090651.1-201ENST00000567865 634 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 SS18L2P2-201ENST00000583960 235 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 BNIP3P4-201ENST00000604946 565 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC069545.1-201ENST00000605671 358 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC141002.1-201ENST00000607025 279 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL121757.2-201ENST00000611223 313 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC024255.1-201ENST00000614376 102 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AL691477.1-201ENST00000624398 162 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 MIR4278-201ENST00000636094 69 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 AC092724.1-201ENST00000624623 3397 ntBASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CSB-PGBD3P0DP91 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AP000776.1-201ENST00000530032 1663 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RNU4-76P-201ENST00000364509 141 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RNU6-707P-201ENST00000364647 95 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC092745.2-202ENST00000411880 369 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC007899.1-201ENST00000412776 775 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 OR2AT2P-201ENST00000413438 905 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FNDC3CP-201ENST00000420795 1155 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MTCO1P3-201ENST00000429327 192 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RPL7P29-201ENST00000437151 728 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC002504.1-201ENST00000438281 691 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms