Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPL7P41-201ENST00000485823 957 ntBASIC5.04□□□□□ -1.6
PDGFBP01127 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFBP01127 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
PDGFBP01127 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFBP01127 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFBP01127 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDGFBP01127 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 AC026523.2-201ENST00000625039 7739 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AL359955.1-201ENST00000455242 3275 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDGFBP01127 RNA5SP509-201ENST00000364577 119 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDGFBP01127 MIR589-201ENST00000385238 99 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 RPL17P50-201ENST00000396131 546 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 SNORA11F-201ENST00000408237 128 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 BTF3P9-201ENST00000418784 283 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AC009506.2-201ENST00000420635 840 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFBP01127 RPL5P2-201ENST00000429598 854 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 RSL24D1P2-201ENST00000445584 366 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 Z95327.1-201ENST00000446082 482 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 EEF1A1P1-201ENST00000447052 739 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC098799.1-201ENST00000504752 800 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC097173.1-201ENST00000505862 819 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC106806.2-201ENST00000509365 500 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFBP01127 RNU2-30P-201ENST00000516209 141 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC022387.2-201ENST00000604050 448 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 BNIP3P35-201ENST00000604530 490 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AC011626.1-201ENST00000604710 562 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 BNIP3P7-201ENST00000605641 516 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 AC000095.2-202ENST00000637415 154 ntBASIC5.03□□□□□ -1.6
PDGFBP01127 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
PDGFBP01127 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PDGFBP01127 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFBP01127 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFBP01127 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
PDGFBP01127 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 AL592148.3-201ENST00000608771 2646 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFBP01127 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 AL731566.1-201ENST00000620490 1937 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 MIR133A2-201ENST00000347538 102 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 SNORA70.10-201ENST00000384515 134 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 OR6C69P-201ENST00000394268 893 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AL607077.1-201ENST00000401718 499 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AL034374.1-201ENST00000406329 351 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 RPL36AP36-201ENST00000418616 301 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFBP01127 NPM1P18-201ENST00000434232 732 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFBP01127 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFBP01127 XKRYP6-201ENST00000440468 1116 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 XKRYP3-201ENST00000442113 1116 ntBASIC5.02□□□□□ -1.61
PDGFBP01127 LINC02210-201ENST00000444561 288 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms