Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC092651.1-201ENST00000426110 312 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 NPM1P29-201ENST00000483112 803 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC022133.1-201ENST00000490961 571 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 MTCO1P31-201ENST00000506355 492 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC138409.2-202ENST00000507274 458 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AP001781.1-201ENST00000530977 207 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC053481.3-201ENST00000577881 843 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC022726.1-201ENST00000587475 207 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC008782.1-201ENST00000603386 430 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AL139124.1-201ENST00000609123 421 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC068787.1-201ENST00000623908 691 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 AL109659.3-201ENST00000624985 950 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC106754.1-201ENST00000562632 1513 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 CCAT2-201ENST00000630920 1752 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 MAPK10-263ENST00000641052 4307 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL360270.2-201ENST00000562952 5985 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL121657.1-201ENST00000327215 531 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 SNORA70C-201ENST00000384538 135 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 CEACAMP8-201ENST00000413902 580 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL606495.1-201ENST00000422100 813 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 HMGB1P4-201ENST00000455362 567 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 NPM1P21-201ENST00000513394 762 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 OR8G5-201ENST00000524943 1041 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 OR7E13P-201ENST00000526052 910 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AC093014.1-201ENST00000548926 724 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AC006130.2-201ENST00000586202 326 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 QTRT1P1-201ENST00000604344 1078 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 RNA5SP196-201ENST00000625967 102 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AC097655.1-201ENST00000635075 318 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RAPGEF3O95398 ECM1P2-201ENST00000503354 1577 ntBASIC7.4□□□□□ -1.22
RAPGEF3O95398 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.4□□□□□ -1.22
RAPGEF3O95398 RAD17P1-201ENST00000418130 2042 ntBASIC7.4□□□□□ -1.23
RAPGEF3O95398 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
RAPGEF3O95398 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RAPGEF3O95398 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RAPGEF3O95398 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 SMG1P7-201ENST00000565246 2704 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 RN7SKP224-201ENST00000364140 325 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 SNORA70.4-201ENST00000365509 134 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 SNORA11F-201ENST00000408237 128 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 ARL2BPP3-201ENST00000421226 480 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 OR4C10P-201ENST00000434991 931 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 RPL32P14-201ENST00000463196 378 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC022916.3-201ENST00000592961 742 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC114781.5-201ENST00000615297 108 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms